Difference between revisions of "CYTIDEAM-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-782 PWY-782] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-330...")
(Created page with "Category:reaction == Reaction CYTIDEAM-RXN == * direction: ** left-to-right * common-name: ** deoxycytidine deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.5...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-782 PWY-782] ==
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== Reaction CYTIDEAM-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
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** glycolipid desaturation
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** deoxycytidine deaminase
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== Reaction(s) found ==
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* ec-number:
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* [[RXN-8295]]
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** [http://enzyme.expasy.org/EC/3.5.4.5 ec-3.5.4.5]
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* [[RXN-8297]]
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== Reaction formula ==
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* [[RXN-8299]]
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* 1 [[DEOXYCYTIDINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[DEOXYURIDINE]][c]
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* [[RXN-8301]]
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== Gene(s) associated with this reaction  ==
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* [[RXN-8303]]
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* Gene: [[SJ17454]]
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* [[RXN-8306]]
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** Category: [[annotation]]
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* [[RXN-8309]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[RXN-8310]]
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== Pathway(s)  ==
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* [[RXN-8311]]
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* [[PWY-7199]], pyrimidine deoxyribonucleosides salvage:
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* [[RXN-8313]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[RXN-8314]]
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* [[PWY-7181]], pyrimidine deoxyribonucleosides degradation:
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* [[RXN-8364]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[RXN-8365]]
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== Reconstruction information  ==
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* [[RXN-8366]]
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8367]]
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== External links  ==
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* [[RXN-8368]]
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* METANETX-RXN : MNXR97207
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== Reaction(s) not found ==
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* RHEA:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8305 RXN-8305]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13434 13434]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8307 RXN-8307]
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* LIGAND-RXN:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8308 RXN-8308]
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** [http://www.genome.jp/dbget-bin/www_bget?R02485 R02485]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8302 RXN-8302]
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* UNIPROT:
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8296 RXN-8296]
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** [http://www.uniprot.org/uniprot/P47718 P47718]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8369 RXN-8369]
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** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8363 RXN-8363]
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** [http://www.uniprot.org/uniprot/P47298 P47298]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8294 RXN-8294]
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** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8304 RXN-8304]
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** [http://www.uniprot.org/uniprot/P32320 P32320]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8300 RXN-8300]
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** [http://www.uniprot.org/uniprot/P75051 P75051]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-1728 RXN-1728]
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** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8298 RXN-8298]
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** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
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{{#set: taxonomic-range=tax-33090}}
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** [http://www.uniprot.org/uniprot/O65571 O65571]
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{{#set: common-name=glycolipid desaturation}}
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** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
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{{#set: nb reaction found=16}}
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** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
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{{#set: completion rate=0.57}}
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** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
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{{#set: nb total reaction=28}}
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** [http://www.uniprot.org/uniprot/O65896 O65896]
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{{#set: direction=left-to-right}}
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{{#set: common-name=deoxycytidine deaminase}}
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{{#set: ec-number=ec-3.5.4.5}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction CYTIDEAM-RXN

  • direction:
    • left-to-right
  • common-name:
    • deoxycytidine deaminase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7199, pyrimidine deoxyribonucleosides salvage:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7181, pyrimidine deoxyribonucleosides degradation:
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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