Difference between revisions of "DGDPKIN-RXN"

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(Created page with "Category:reaction == Reaction RXN-11837 == * direction: ** left-to-right * common-name: ** 23s rrna pseudouridine1911/1915/1917 synthase * ec-number: ** [http://enzyme.exp...")
(Created page with "Category:reaction == Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN == * direction: ** reversible * common-name: ** benzaldehyde dehydrogenase (nad+) * ec-number: ** [http:/...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-11837 ==
+
== Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** 23s rrna pseudouridine1911/1915/1917 synthase
+
** benzaldehyde dehydrogenase (nad+)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.4.99.23 ec-5.4.99.23]
+
** [http://enzyme.expasy.org/EC/1.2.1.28 ec-1.2.1.28]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[23S-rRNA-uridine1911-1915-1917]][c] '''=>''' 1 [[23S-rRNA-pseudouridine1911-1915-1917]][c]
+
* 1 [[BENZALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[BENZOATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04758]]
+
* Gene: [[SJ06456]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ22218]]
+
* Gene: [[SJ06470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ19688]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6766]], salicin biosynthesis:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6763]], salicortin biosynthesis:
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6444]], benzoate biosynthesis II (CoA-independent, non-&beta;-oxidative):
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[TOLUENE-DEG-CATECHOL-PWY]], toluene degradation to benzoate:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1501]], mandelate degradation I:
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6446]], benzoate biosynthesis III (CoA-dependent, non-&beta;-oxidative):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42525 42525]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01419 R01419]
−
{{#set: direction=left-to-right}}
+
* UNIPROT:
−
{{#set: common-name=23s rrna pseudouridine1911/1915/1917 synthase}}
+
** [http://www.uniprot.org/uniprot/P43503 P43503]
−
{{#set: ec-number=ec-5.4.99.23}}
+
{{#set: direction=reversible}}
−
{{#set: nb gene associated=3}}
+
{{#set: common-name=benzaldehyde dehydrogenase (nad+)}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-1.2.1.28}}
 +
{{#set: nb gene associated=2}}
 +
{{#set: nb pathway associated=6}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}
 
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 15:04, 5 January 2021

Reaction BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN

  • direction:
    • reversible
  • common-name:
    • benzaldehyde dehydrogenase (nad+)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6766, salicin biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6763, salicortin biosynthesis:
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6444, benzoate biosynthesis II (CoA-independent, non-β-oxidative):
    • 1 reactions found over 4 reactions in the full pathway
  • TOLUENE-DEG-CATECHOL-PWY, toluene degradation to benzoate:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1501, mandelate degradation I:
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6446, benzoate biosynthesis III (CoA-dependent, non-β-oxidative):
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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