Difference between revisions of "DIHYDROFOLATEREDUCT-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-3...")
(Created page with "Category:reaction == Reaction UROGENIIISYN-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen iii synthase * ec-number: ** [http://enzyme.expasy.org/E...")
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6313 PWY-6313] ==
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== Reaction UROGENIIISYN-RXN ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33208 tax-33208]
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** left-to-right
 
* common-name:
 
* common-name:
** serotonin degradation
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** uroporphyrinogen iii synthase
== Reaction(s) found ==
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* ec-number:
* [[RXN-10777]]
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** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
* [[RXN-10778]]
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== Reaction formula ==
* [[RXN-10780]]
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* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
* [[RXN-10781]]
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== Gene(s) associated with this reaction  ==
* [[RXN-10782]]
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* Gene: [[SJ19532]]
* [[RXN-10784]]
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** Category: [[annotation]]
== Reaction(s) not found ==
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10779 RXN-10779]
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** Category: [[orthology]]
{{#set: taxonomic-range=tax-33208}}
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: common-name=serotonin degradation}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
{{#set: nb reaction found=6}}
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== Pathway(s) ==
{{#set: completion rate=0.86}}
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* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
{{#set: nb total reaction=7}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== External links  ==
 +
* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P10746 P10746]
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** [http://www.uniprot.org/uniprot/P51163 P51163]
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** [http://www.uniprot.org/uniprot/P21248 P21248]
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** [http://www.uniprot.org/uniprot/Q58401 Q58401]
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** [http://www.uniprot.org/uniprot/P09126 P09126]
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** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 +
{{#set: direction=left-to-right}}
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{{#set: common-name=uroporphyrinogen iii synthase}}
 +
{{#set: ec-number=ec-4.2.1.75}}
 +
{{#set: nb gene associated=1}}
 +
{{#set: nb pathway associated=2}}
 +
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}

Revision as of 20:44, 18 December 2020

Reaction UROGENIIISYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • uroporphyrinogen iii synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5189, tetrapyrrole biosynthesis II (from glycine):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links