Difference between revisions of "DIHYDROFOLATEREDUCT-RXN"

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(Created page with "Category:reaction == Reaction UROGENIIISYN-RXN == * direction: ** left-to-right * common-name: ** uroporphyrinogen iii synthase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction H2Othu == * direction: ** reversible * common-name: ** h2o transport by passive diffusion, thylakoid lumen == Reaction formula == * 1.0 WAT...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction UROGENIIISYN-RXN ==
+
== Reaction H2Othu ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** uroporphyrinogen iii synthase
+
** h2o transport by passive diffusion, thylakoid lumen
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
+
* 1.0 [[WATER]][u] '''<=>''' 1.0 [[WATER]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ19532]]
+
* Gene: [[SJ00591]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14495]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
+
{{#set: common-name=h2o transport by passive diffusion, thylakoid lumen}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/P10746 P10746]
+
{{#set: reconstruction tool=pantograph}}
−
** [http://www.uniprot.org/uniprot/P51163 P51163]
 
−
** [http://www.uniprot.org/uniprot/P21248 P21248]
 
−
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 
−
** [http://www.uniprot.org/uniprot/P09126 P09126]
 
−
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=uroporphyrinogen iii synthase}}
 
−
{{#set: ec-number=ec-4.2.1.75}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 15:05, 5 January 2021

Reaction H2Othu

  • direction:
    • reversible
  • common-name:
    • h2o transport by passive diffusion, thylakoid lumen

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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