Difference between revisions of "DNA-CYTOSINE-5--METHYLTRANSFERASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDECARBOX-RXN GLUTDECARBOX-RXN] == * direction: ** left-to-right * ec-number: ** [http://enzyme....")
(Created page with "Category:reaction == Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN == * direction: ** reversible * common-name: ** nad+ adp-ribosyltransferase * ec-number: ** [http://enzyme.ex...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTDECARBOX-RXN GLUTDECARBOX-RXN] ==
+
== Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 +
* common-name:
 +
** nad+ adp-ribosyltransferase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.1.15 ec-4.1.1.15]
+
** [http://enzyme.expasy.org/EC/2.4.2.30 ec-2.4.2.30]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ADP-D-Ribosyl-Acceptors]][c] '''+''' 1 [[NIACINAMIDE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ12405]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ12212]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05422]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ15997]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00694]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15978]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ15979]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21479]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ10040]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ13521]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ19643]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY0-1305]], L-glutamate degradation IX (via 4-aminobutanoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1305 PWY0-1305]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
* [[GLUDEG-I-PWY]], GABA shunt: [http://metacyc.org/META/NEW-IMAGE?object=GLUDEG-I-PWY GLUDEG-I-PWY]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-4321]], L-glutamate degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4321 PWY-4321]
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17786 17786]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00261 R00261]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04176 R04176]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P20228 P20228]
+
** [http://www.uniprot.org/uniprot/P09874 P09874]
** [http://www.uniprot.org/uniprot/Q05329 Q05329]
+
** [http://www.uniprot.org/uniprot/P35875 P35875]
** [http://www.uniprot.org/uniprot/P18088 P18088]
+
** [http://www.uniprot.org/uniprot/P26446 P26446]
** [http://www.uniprot.org/uniprot/P14748 P14748]
+
** [http://www.uniprot.org/uniprot/P18493 P18493]
** [http://www.uniprot.org/uniprot/Q07346 Q07346]
+
** [http://www.uniprot.org/uniprot/Q08824 Q08824]
** [http://www.uniprot.org/uniprot/Q99259 Q99259]
+
** [http://www.uniprot.org/uniprot/P11103 P11103]
** [http://www.uniprot.org/uniprot/P69910 P69910]
+
** [http://www.uniprot.org/uniprot/P14299 P14299]
** [http://www.uniprot.org/uniprot/Q9CG20 Q9CG20]
+
** [http://www.uniprot.org/uniprot/P27008 P27008]
** [http://www.uniprot.org/uniprot/P48321 P48321]
+
** [http://www.uniprot.org/uniprot/P31669 P31669]
** [http://www.uniprot.org/uniprot/P48319 P48319]
+
** [http://www.uniprot.org/uniprot/Q11208 Q11208]
** [http://www.uniprot.org/uniprot/Q05683 Q05683]
+
** [http://www.uniprot.org/uniprot/Q11207 Q11207]
** [http://www.uniprot.org/uniprot/Q24062 Q24062]
+
** [http://www.uniprot.org/uniprot/O50017 O50017]
** [http://www.uniprot.org/uniprot/P69908 P69908]
+
** [http://www.uniprot.org/uniprot/O24570 O24570]
** [http://www.uniprot.org/uniprot/P48320 P48320]
+
** [http://www.uniprot.org/uniprot/Q9ZP54 Q9ZP54]
** [http://www.uniprot.org/uniprot/Q59956 Q59956]
+
** [http://www.uniprot.org/uniprot/P04977 P04977]
** [http://www.uniprot.org/uniprot/P48318 P48318]
+
{{#set: direction=reversible}}
** [http://www.uniprot.org/uniprot/Q49854 Q49854]
+
{{#set: common-name=nad+ adp-ribosyltransferase}}
** [http://www.uniprot.org/uniprot/Q49855 Q49855]
+
{{#set: ec-number=ec-2.4.2.30}}
** [http://www.uniprot.org/uniprot/Q49863 Q49863]
+
{{#set: nb gene associated=10}}
** [http://www.uniprot.org/uniprot/O81101 O81101]
+
{{#set: nb pathway associated=0}}
</div>
+
{{#set: reconstruction category=annotation|orthology}}
{{#set: direction=left-to-right}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
{{#set: ec-number=ec-4.1.1.15}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:42, 18 December 2020

Reaction NAD+-ADP-RIBOSYLTRANSFERASE-RXN

  • direction:
    • reversible
  • common-name:
    • nad+ adp-ribosyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links