Difference between revisions of "DTMPKI-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax...")
(Created page with "Category:reaction == Reaction DTMPKI-RXN == * direction: ** left-to-right * common-name: ** dtmp kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.4.12 ec-2.7.4.12]...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROPIONMET-PWY PROPIONMET-PWY] ==
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== Reaction DTMPKI-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2759 tax-2759]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-33154 tax-33154]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
 
* common-name:
 
* common-name:
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** propanoyl coa degradation i
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** dtmp kinase
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== Reaction(s) found ==
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* ec-number:
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* [[PROPIONYL-COA-CARBOXY-RXN]]
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** [http://enzyme.expasy.org/EC/2.7.4.12 ec-2.7.4.12]
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== Reaction(s) not found ==
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** [http://enzyme.expasy.org/EC/2.7.4.13 ec-2.7.4.13]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-EPIM-RXN METHYLMALONYL-COA-EPIM-RXN]
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** [http://enzyme.expasy.org/EC/2.7.4.9 ec-2.7.4.9]
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* [http://metacyc.org/META/NEW-IMAGE?object=METHYLMALONYL-COA-MUT-RXN METHYLMALONYL-COA-MUT-RXN]
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== Reaction formula ==
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{{#set: taxonomic-range=tax-2759|tax-2157|tax-33154|tax-2}}
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* 1 [[ATP]][c] '''+''' 1 [[TMP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[TDP]][c]
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{{#set: common-name=propanoyl coa degradation i}}
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== Gene(s) associated with this reaction  ==
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{{#set: nb reaction found=1}}
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* Gene: [[SJ01455]]
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{{#set: completion rate=0.33}}
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** Category: [[annotation]]
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{{#set: nb total reaction=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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== Pathway(s) ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I:
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III:
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II:
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
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** '''14''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP:
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV:
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7197]], pyrimidine deoxyribonucleotide phosphorylation:
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* METANETX-RXN : MNXR97804
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02094 R02094]
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13518 13518]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q57741 Q57741]
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** [http://www.uniprot.org/uniprot/Q9PPF3 Q9PPF3]
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** [http://www.uniprot.org/uniprot/P0A720 P0A720]
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** [http://www.uniprot.org/uniprot/Q8X8H7 Q8X8H7]
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** [http://www.uniprot.org/uniprot/Q9JVE7 Q9JVE7]
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** [http://www.uniprot.org/uniprot/P33803 P33803]
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** [http://www.uniprot.org/uniprot/P42490 P42490]
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** [http://www.uniprot.org/uniprot/P00572 P00572]
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** [http://www.uniprot.org/uniprot/Q80HT9 Q80HT9]
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** [http://www.uniprot.org/uniprot/P68693 P68693]
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** [http://www.uniprot.org/uniprot/P23919 P23919]
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** [http://www.uniprot.org/uniprot/P36590 P36590]
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** [http://www.uniprot.org/uniprot/Q9RA29 Q9RA29]
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** [http://www.uniprot.org/uniprot/O81650 O81650]
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</div>
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{{#set: direction=left-to-right}}
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{{#set: common-name=dtmp kinase}}
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{{#set: ec-number=ec-2.7.4.12|ec-2.7.4.13|ec-2.7.4.9}}
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{{#set: nb gene associated=1}}
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{{#set: nb pathway associated=7}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction DTMPKI-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III:
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7187, pyrimidine deoxyribonucleotides de novo biosynthesis II:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli):
    • 14 reactions found over 13 reactions in the full pathway
  • PWY-7210, pyrimidine deoxyribonucleotides biosynthesis from CTP:
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198, pyrimidine deoxyribonucleotides de novo biosynthesis IV:
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7197, pyrimidine deoxyribonucleotide phosphorylation:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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