Difference between revisions of "ENOYL-ACP-REDUCT-NADH-RXN"

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(Created page with "Category:reaction == Reaction 2.8.2.23-RXN == * direction: ** left-to-right * common-name: ** [heparan sulfate]-glucosamine 3-sulfotransferase 1 ** [heparan sulfate]-&alph...")
(Created page with "Category:reaction == Reaction ENOYL-ACP-REDUCT-NADH-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated-fatty-acid-[acp] reductase ** 2,3,4-saturated fa...")
 
(4 intermediate revisions by 3 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.8.2.23-RXN ==
+
== Reaction ENOYL-ACP-REDUCT-NADH-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** [heparan sulfate]-glucosamine 3-sulfotransferase 1
+
** 2,3,4-saturated-fatty-acid-[acp] reductase
−
** [heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase
+
** 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.8.2.23 ec-2.8.2.23]
+
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[Heparan-sulfate-D-GlcNS]][c] '''+''' 1 [[PAPS]][c] '''=>''' 1 [[3-5-ADP]][c] '''+''' 1 [[Heparan-sulfate-3-N-disulfate]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ00944]]
+
* Gene: [[SJ00320]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ17721]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ21424]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ08012]]
+
* Gene: [[SJ03883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20108]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ07694]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6558]], heparan sulfate biosynthesis (late stages):
+
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
−
** '''7''' reactions found over '''13''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15462 15462]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01403 R01403]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16657 P16657]
 +
** [http://www.uniprot.org/uniprot/O24990 O24990]
 +
** [http://www.uniprot.org/uniprot/Q9JSS8 Q9JSS8]
 +
** [http://www.uniprot.org/uniprot/P0A5Y6 P0A5Y6]
 +
** [http://www.uniprot.org/uniprot/O84106 O84106]
 +
** [http://www.uniprot.org/uniprot/Q9PMQ7 Q9PMQ7]
 +
** [http://www.uniprot.org/uniprot/P07149 P07149]
 +
** [http://www.uniprot.org/uniprot/P0AEK4 P0AEK4]
 +
** [http://www.uniprot.org/uniprot/Q51891 Q51891]
 +
** [http://www.uniprot.org/uniprot/O04945 O04945]
 +
** [http://www.uniprot.org/uniprot/O04946 O04946]
 +
** [http://www.uniprot.org/uniprot/O24207 O24207]
 +
** [http://www.uniprot.org/uniprot/P93062 P93062]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=[heparan sulfate]-α-d-n-sulfoglucosamine 3-o-sulfotransferase|[heparan sulfate]-glucosamine 3-sulfotransferase 1}}
+
{{#set: common-name=2,3,4-saturated-fatty-acid-[acp] reductase|2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase}}
−
{{#set: ec-number=ec-2.8.2.23}}
+
{{#set: ec-number=ec-1.3.1.9}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction ENOYL-ACP-REDUCT-NADH-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2,3,4-saturated-fatty-acid-[acp] reductase
    • 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FASYN-ELONG-PWY, fatty acid elongation -- saturated:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "2,3,4-saturated-fatty-acid-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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