Difference between revisions of "ENOYL-ACP-REDUCT-NADH-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] == * direction: ** left-to-right * common-name: ** indole-3-glycerol phospha...")
 
(Created page with "Category:reaction == Reaction ENOYL-ACP-REDUCT-NADH-RXN == * direction: ** left-to-right * common-name: ** 2,3,4-saturated-fatty-acid-[acp] reductase ** 2,3,4-saturated fa...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] ==
+
== Reaction ENOYL-ACP-REDUCT-NADH-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** indole-3-glycerol phosphate synthase
+
** 2,3,4-saturated-fatty-acid-[acp] reductase
 +
** 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.48 ec-4.1.1.48]
+
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[INDOLE-3-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[TRANS-D2-ENOYL-ACP]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ01083]]
+
* Gene: [[SJ00320]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ03883]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ17722]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ04593]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
+
* [[FASYN-ELONG-PWY]], fatty acid elongation -- saturated:
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23477 23477]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03508 R03508]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01403 R01403]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P42393 P42393]
+
** [http://www.uniprot.org/uniprot/P16657 P16657]
−
** [http://www.uniprot.org/uniprot/P20577 P20577]
+
** [http://www.uniprot.org/uniprot/O24990 O24990]
−
** [http://www.uniprot.org/uniprot/P18304 P18304]
+
** [http://www.uniprot.org/uniprot/Q9JSS8 Q9JSS8]
−
** [http://www.uniprot.org/uniprot/Q06121 Q06121]
+
** [http://www.uniprot.org/uniprot/P0A5Y6 P0A5Y6]
−
** [http://www.uniprot.org/uniprot/Q9V1G3 Q9V1G3]
+
** [http://www.uniprot.org/uniprot/O84106 O84106]
−
** [http://www.uniprot.org/uniprot/P20578 P20578]
+
** [http://www.uniprot.org/uniprot/Q9PMQ7 Q9PMQ7]
−
** [http://www.uniprot.org/uniprot/Q9PI11 Q9PI11]
+
** [http://www.uniprot.org/uniprot/P07149 P07149]
−
** [http://www.uniprot.org/uniprot/Q58328 Q58328]
+
** [http://www.uniprot.org/uniprot/P0AEK4 P0AEK4]
−
** [http://www.uniprot.org/uniprot/Q9JSN4 Q9JSN4]
+
** [http://www.uniprot.org/uniprot/Q51891 Q51891]
−
** [http://www.uniprot.org/uniprot/P03964 P03964]
+
** [http://www.uniprot.org/uniprot/O04945 O04945]
−
** [http://www.uniprot.org/uniprot/P00910 P00910]
+
** [http://www.uniprot.org/uniprot/O04946 O04946]
−
** [http://www.uniprot.org/uniprot/P00909 P00909]
+
** [http://www.uniprot.org/uniprot/O24207 O24207]
−
** [http://www.uniprot.org/uniprot/P00911 P00911]
+
** [http://www.uniprot.org/uniprot/P93062 P93062]
−
** [http://www.uniprot.org/uniprot/P17217 P17217]
 
−
** [http://www.uniprot.org/uniprot/P20409 P20409]
 
−
** [http://www.uniprot.org/uniprot/P00937 P00937]
 
−
** [http://www.uniprot.org/uniprot/P00908 P00908]
 
−
** [http://www.uniprot.org/uniprot/P05328 P05328]
 
−
** [http://www.uniprot.org/uniprot/P06531 P06531]
 
−
** [http://www.uniprot.org/uniprot/P18483 P18483]
 
−
** [http://www.uniprot.org/uniprot/P25170 P25170]
 
−
** [http://www.uniprot.org/uniprot/P26938 P26938]
 
−
** [http://www.uniprot.org/uniprot/P24773 P24773]
 
−
** [http://www.uniprot.org/uniprot/Q01999 Q01999]
 
−
** [http://www.uniprot.org/uniprot/Q9YGB5 Q9YGB5]
 
−
** [http://www.uniprot.org/uniprot/Q9S591 Q9S591]
 
−
** [http://www.uniprot.org/uniprot/Q9X7C7 Q9X7C7]
 
−
** [http://www.uniprot.org/uniprot/Q92370 Q92370]
 
−
** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7]
 
−
** [http://www.uniprot.org/uniprot/P94327 P94327]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=indole-3-glycerol phosphate synthase}}
+
{{#set: common-name=2,3,4-saturated-fatty-acid-[acp] reductase|2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase}}
−
{{#set: ec-number=ec-4.1.1.48}}
+
{{#set: ec-number=ec-1.3.1.9}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction ENOYL-ACP-REDUCT-NADH-RXN

  • direction:
    • left-to-right
  • common-name:
    • 2,3,4-saturated-fatty-acid-[acp] reductase
    • 2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FASYN-ELONG-PWY, fatty acid elongation -- saturated:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "2,3,4-saturated-fatty-acid-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "2,3,4-saturated fatty acyl-[acp]:nad+ oxidoreductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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