Difference between revisions of "GLUCURONATE-REDUCTASE-RXN"

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(Created page with "Category:reaction == Reaction TREHALOSEPHOSPHA-RXN == * direction: ** left-to-right * common-name: ** trehalose-6-phosphate phosphatase * ec-number: ** [http://enzyme.expa...")
(Created page with "Category:reaction == Reaction GLUCURONATE-REDUCTASE-RXN == * direction: ** left-to-right * common-name: ** l-glucuronate reductase * ec-number: ** [http://enzyme.expasy.or...")
 
(2 intermediate revisions by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TREHALOSEPHOSPHA-RXN ==
+
== Reaction GLUCURONATE-REDUCTASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** trehalose-6-phosphate phosphatase
+
** l-glucuronate reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.3.12 ec-3.1.3.12]
+
** [http://enzyme.expasy.org/EC/1.1.1.19 ec-1.1.1.19]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[TREHALOSE-6P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[TREHALOSE]][c]
+
* 1 [[CPD-15530]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-GULONATE]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ05644]]
−
* Gene: [[SJ07303]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ08873]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18387]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21183]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ21324]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21325]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ18485]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ13486]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17025]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ10128]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7900]], glycogen biosynthesis III (from &alpha;-maltose 1-phosphate):
+
* [[PWY-5525]], D-glucuronate degradation I:
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-881]], trehalose biosynthesis II:
+
* [[PWY3DJ-35471]], L-ascorbate biosynthesis IV (animals, D-glucuronate pathway):
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[TREHALOSESYN-PWY]], trehalose biosynthesis III:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TRESYN-PWY]], trehalose biosynthesis I:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115924
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14911 14911]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02778 R02778]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01481 R01481]
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23420 23420]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P31678 P31678]
 
−
** [http://www.uniprot.org/uniprot/P31688 P31688]
 
−
** [http://www.uniprot.org/uniprot/Q00786 Q00786]
 
−
** [http://www.uniprot.org/uniprot/P78875 P78875]
 
−
** [http://www.uniprot.org/uniprot/O64896 O64896]
 
−
** [http://www.uniprot.org/uniprot/O64897 O64897]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=trehalose-6-phosphate phosphatase}}
+
{{#set: common-name=l-glucuronate reductase}}
−
{{#set: ec-number=ec-3.1.3.12}}
+
{{#set: ec-number=ec-1.1.1.19}}
−
{{#set: nb gene associated=10}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction GLUCURONATE-REDUCTASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-glucuronate reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5525, D-glucuronate degradation I:
    • 2 reactions found over 5 reactions in the full pathway
  • PWY3DJ-35471, L-ascorbate biosynthesis IV (animals, D-glucuronate pathway):
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115924
  • RHEA:
  • LIGAND-RXN:





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