Difference between revisions of "HACD7h"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] == * direction: ** left-to-right * common-name: ** 6,7-dimethyl-8-...")
(Created page with "Category:reaction == Reaction HACD7h == * direction: ** reversible * common-name: ** 3-hydroxyacyl-coa dehydrogenase (c16:0) == Reaction formula == * 1.0 3-OXOPALMITOYL-...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LUMAZINESYN-RXN LUMAZINESYN-RXN] ==
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== Reaction HACD7h ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
 
* common-name:
 
* common-name:
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** 6,7-dimethyl-8-ribityllumazine synthase
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** 3-hydroxyacyl-coa dehydrogenase (c16:0)
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.5.1.78 ec-2.5.1.78]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE]][c] '''+''' 1 [[DIHYDROXY-BUTANONE-P]][c] '''=>''' 1 [[DIMETHYL-D-RIBITYL-LUMAZINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[WATER]][c]
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* 1.0 [[3-OXOPALMITOYL-COA]][h] '''+''' 1.0 [[NADH]][h] '''+''' 1.0 [[PROTON]][h] '''<=>''' 1.0 [[CPD0-2232]][h] '''+''' 1.0 [[NAD]][h]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ04442]]
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* Gene: [[SJ03584]]
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ21390]]
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** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6167]], flavin biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6167 PWY-6167]
 
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** '''5''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 
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** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
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{{#set: direction=reversible}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04457 R04457]
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{{#set: common-name=3-hydroxyacyl-coa dehydrogenase (c16:0)}}
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* RHEA:
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{{#set: nb gene associated=2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26152 26152]
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{{#set: nb pathway associated=0}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction category=orthology}}
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{{#set: common-name=6,7-dimethyl-8-ribityllumazine synthase}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: ec-number=ec-2.5.1.78}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation|orthology}}
 
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Latest revision as of 11:19, 18 March 2021

Reaction HACD7h

  • direction:
    • reversible
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase (c16:0)

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HACD7h&oldid=140336"