Difference between revisions of "HCO3"

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(Created page with "Category:metabolite == Metabolite GLN == * common-name: ** l-glutamine * smiles: ** c(=o)(n)ccc([n+])c([o-])=o * inchi-key: ** zdxpyrjpndtmrx-vkhmyheasa-n * molecular-weig...")
(Created page with "Category:gene == Gene SJ03921 == * transcription-direction: ** positive * right-end-position: ** 27507 * left-end-position: ** 21659 * centisome-position: ** 18.84686...")
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[[Category:metabolite]]
+
[[Category:gene]]
== Metabolite GLN ==
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== Gene SJ03921 ==
* common-name:
+
* transcription-direction:
** l-glutamine
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** positive
* smiles:
+
* right-end-position:
** c(=o)(n)ccc([n+])c([o-])=o
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** 27507
* inchi-key:
+
* left-end-position:
** zdxpyrjpndtmrx-vkhmyheasa-n
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** 21659
* molecular-weight:
+
* centisome-position:
** 146.146
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** 18.84686   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[S.japonica_carotenoid_curated]]
* [[2.6.1.64-RXN]]
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== Reaction(s) associated ==
* [[6.3.5.6-RXN]]
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* [[ATPASE-RXN]]
* [[6.3.5.7-RXN]]
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** Category: [[annotation]]
* [[ANTHRANSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ASNSYNB-RXN]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
* [[CARBPSYN-RXN]]
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** Category: [[annotation]]
* [[CTPSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[FGAMSYN-RXN]]
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* [[RXN-11135]]
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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** Category: [[annotation]]
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GLUTAMATESYN-RXN]]
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* [[RXN-12195]]
* [[GLUTAMIDOTRANS-RXN]]
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** Category: [[annotation]]
* [[GLUTAMIN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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* [[RXN-12196]]
* [[GMP-SYN-GLUT-RXN]]
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** Category: [[annotation]]
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NAD-SYNTH-GLN-RXN]]
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* [[RXN0-5462]]
* [[PABASYN-RXN]]
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** Category: [[annotation]]
* [[PRPPAMIDOTRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-11322]]
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== Pathway(s) associated ==
* [[biomass_rxn]]
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* [[PWY-6545]]
</div>
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** '''8''' reactions found over '''9''' reactions in the full pathway
== Reaction(s) known to produce the compound ==
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* [[PWY-7210]]
* [[2.6.1.64-RXN]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
* [[ANTHRANSYN-RXN]]
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* [[PWY-7198]]
* [[GLUTAMINESYN-RXN]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
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* [[PWY-7184]]
* [[PABASYN-RXN]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PRPPAMIDOTRANS-RXN]]
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{{#set: transcription-direction=positive}}
* [[RXN0-6976]]
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{{#set: right-end-position=27507}}
* [[RXN0-6983]]
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{{#set: left-end-position=21659}}
== Reaction(s) of unknown directionality ==
+
{{#set: centisome-position=18.84686    }}
{{#set: common-name=l-glutamine}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: inchi-key=inchikey=zdxpyrjpndtmrx-vkhmyheasa-n}}
+
{{#set: nb reaction associated=6}}
{{#set: molecular-weight=146.146}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:23, 15 March 2021

Gene SJ03921

  • transcription-direction:
    • positive
  • right-end-position:
    • 27507
  • left-end-position:
    • 21659
  • centisome-position:
    • 18.84686

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway