Difference between revisions of "HEMEOSYN-RXN"

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(Created page with "Category:reaction == Reaction RXN-8032 == * direction: ** reversible * common-name: ** 3-ketopimelyl-coa thiolase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3...")
(Created page with "Category:reaction == Reaction HEMEOSYN-RXN == * direction: ** left-to-right * common-name: ** heme o biosynthesis ** protoheme ix farnesyltransferase * ec-number: ** [http...")
 
(One intermediate revision by one other user not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-8032 ==
+
== Reaction HEMEOSYN-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** 3-ketopimelyl-coa thiolase
+
** heme o biosynthesis
 +
** protoheme ix farnesyltransferase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1 ec-2.3.1]
+
** [http://enzyme.expasy.org/EC/2.5.1.141 ec-2.5.1.141]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[3-OXOPIMELOYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[GLUTARYL-COA]][c]
+
* 1 [[FARNESYL-PP]][c] '''+''' 1 [[PROTOHEME]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-17063]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15041]]
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* Gene: [[SJ10781]]
−
** Category: [[orthology]]
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** Category: [[annotation]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P321-PWY]], benzoyl-CoA degradation III (anaerobic):
+
* [[PWY-7856]], heme a biosynthesis:
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7401]], crotonate fermentation (to acetate and cyclohexane carboxylate):
 
−
** '''6''' reactions found over '''15''' reactions in the full pathway
 
−
* [[CENTBENZCOA-PWY]], benzoyl-CoA degradation II (anaerobic):
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR115959
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28071 28071]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05586 R05586]
+
** [http://www.genome.jp/dbget-bin/www_bget?R07411 R07411]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=3-ketopimelyl-coa thiolase}}
+
{{#set: common-name=protoheme ix farnesyltransferase|heme o biosynthesis}}
−
{{#set: ec-number=ec-2.3.1}}
+
{{#set: ec-number=ec-2.5.1.141}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:18, 18 March 2021

Reaction HEMEOSYN-RXN

  • direction:
    • left-to-right
  • common-name:
    • heme o biosynthesis
    • protoheme ix farnesyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7856, heme a biosynthesis:
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR115959
  • RHEA:
  • LIGAND-RXN:





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