Difference between revisions of "HEMEOSYN-RXN"
Jump to navigation
Jump to search
(Created page with "Category:reaction == Reaction RXN-13760 == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.83 ec-2.7.7.83] == Reaction formula == * 1 CPD-7...") |
(Created page with "Category:reaction == Reaction RXN0-1321 == * direction: ** left-to-right * common-name: ** trna-guanine transglycosylase * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2...") |
||
| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN0-1321 == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
| + | * common-name: | ||
| + | ** trna-guanine transglycosylase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.4.2.29 ec-2.4.2.29] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[7-AMINOMETHYL-7-DEAZAGUANINE]][c] '''+''' 1 [[Guanine34-in-tRNAs]][c] '''=>''' 1 [[GUANINE]][c] '''+''' 1 [[tRNA-with-7-aminomethyl-7-deazaguanine]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ12245]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6700]], queuosine biosynthesis I (de novo): | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24105 24105] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R10209 R10209] |
| − | + | {{#set: direction=left-to-right}} | |
| − | + | {{#set: common-name=trna-guanine transglycosylase}} | |
| − | {{#set: | + | {{#set: ec-number=ec-2.4.2.29}} |
| − | {{#set: ec-number=ec-2. | ||
{{#set: nb gene associated=1}} | {{#set: nb gene associated=1}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:13, 14 January 2021
Contents
Reaction RXN0-1321
- direction:
- left-to-right
- common-name:
- trna-guanine transglycosylase
- ec-number:
Reaction formula
- 1 7-AMINOMETHYL-7-DEAZAGUANINE[c] + 1 Guanine34-in-tRNAs[c] => 1 GUANINE[c] + 1 tRNA-with-7-aminomethyl-7-deazaguanine[c]
Gene(s) associated with this reaction
- Gene: SJ12245
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6700, queuosine biosynthesis I (de novo):
- 1 reactions found over 4 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
