Difference between revisions of "HOMOSERKIN-RXN"

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(Created page with "Category:reaction == Reaction RXN-16626 == * direction: ** left-to-right * common-name: ** (9z)-3-oxo-octadec-9-enoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein] r...")
(Created page with "Category:reaction == Reaction HOMOSERKIN-RXN == * direction: ** left-to-right * common-name: ** homoserine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16626 ==
+
== Reaction HOMOSERKIN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** (9z)-3-oxo-octadec-9-enoyl-[acp] reductase
+
** homoserine kinase
−
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[9Z-3-oxo-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-9Z-3-hydroxy-octadec-9-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ04229]]
+
* Gene: [[SJ11564]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ17743]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ13014]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7664]], oleate biosynthesis IV (anaerobic):
+
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis:
−
** '''13''' reactions found over '''14''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-702]], L-methionine biosynthesis II (plants):
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P27722 P27722]
 +
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
 +
** [http://www.uniprot.org/uniprot/P04948 P04948]
 +
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
 +
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
 +
** [http://www.uniprot.org/uniprot/P44504 P44504]
 +
** [http://www.uniprot.org/uniprot/P52991 P52991]
 +
** [http://www.uniprot.org/uniprot/P00547 P00547]
 +
** [http://www.uniprot.org/uniprot/P07128 P07128]
 +
** [http://www.uniprot.org/uniprot/P17423 P17423]
 +
** [http://www.uniprot.org/uniprot/P73646 P73646]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=(9z)-3-oxo-octadec-9-enoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: common-name=homoserine kinase}}
−
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-2.7.1.39}}
−
{{#set: nb gene associated=3}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:27, 15 January 2021

Reaction HOMOSERKIN-RXN

  • direction:
    • left-to-right
  • common-name:
    • homoserine kinase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-THRESYN-PWY, L-threonine biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-702, L-methionine biosynthesis II (plants):
    • 5 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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