Difference between revisions of "HOMOSERKIN-RXN"

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(Created page with "Category:reaction == Reaction HOMOSERKIN-RXN == * direction: ** left-to-right * common-name: ** homoserine kinase * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.39 ec-...")
(Created page with "Category:reaction == Reaction 1.5.5.1-RXN == * direction: ** reversible * common-name: ** electron transfer flavoprotein-ubiquinone oxidoreductase ** electron-transferring...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HOMOSERKIN-RXN ==
+
== Reaction 1.5.5.1-RXN ==
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
−
** homoserine kinase
+
** electron transfer flavoprotein-ubiquinone oxidoreductase
 +
** electron-transferring-flavoprotein dehydrogenase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.1.39 ec-2.7.1.39]
+
** [http://enzyme.expasy.org/EC/1.5.5.1 ec-1.5.5.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[HOMO-SER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[O-PHOSPHO-L-HOMOSERINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ETF-Reduced]][c] '''+''' 1 [[Ubiquinones]][c] '''<=>''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Ubiquinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ11564]]
+
* Gene: [[SJ04490]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02798]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HOMOSER-THRESYN-PWY]], L-threonine biosynthesis:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-702]], L-methionine biosynthesis II (plants):
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=reversible}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13985 13985]
+
{{#set: common-name=electron transfer flavoprotein-ubiquinone oxidoreductase|electron-transferring-flavoprotein dehydrogenase}}
−
* LIGAND-RXN:
+
{{#set: ec-number=ec-1.5.5.1}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01771 R01771]
+
{{#set: nb gene associated=2}}
−
* UNIPROT:
+
{{#set: nb pathway associated=0}}
−
** [http://www.uniprot.org/uniprot/P27722 P27722]
 
−
** [http://www.uniprot.org/uniprot/Q9PIZ3 Q9PIZ3]
 
−
** [http://www.uniprot.org/uniprot/P04948 P04948]
 
−
** [http://www.uniprot.org/uniprot/Q9UZV7 Q9UZV7]
 
−
** [http://www.uniprot.org/uniprot/Q9CGD7 Q9CGD7]
 
−
** [http://www.uniprot.org/uniprot/P44504 P44504]
 
−
** [http://www.uniprot.org/uniprot/P52991 P52991]
 
−
** [http://www.uniprot.org/uniprot/P00547 P00547]
 
−
** [http://www.uniprot.org/uniprot/P07128 P07128]
 
−
** [http://www.uniprot.org/uniprot/P17423 P17423]
 
−
** [http://www.uniprot.org/uniprot/P73646 P73646]
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=homoserine kinase}}
 
−
{{#set: ec-number=ec-2.7.1.39}}
 
−
{{#set: nb gene associated=1}}
 
−
{{#set: nb pathway associated=2}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:07, 5 January 2021

Reaction 1.5.5.1-RXN

  • direction:
    • reversible
  • common-name:
    • electron transfer flavoprotein-ubiquinone oxidoreductase
    • electron-transferring-flavoprotein dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=HOMOSERKIN-RXN&oldid=64780"