Difference between revisions of "HOMSUCTRAN-RXN"

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(Created page with "Category:reaction == Reaction 3.6.1.17-RXN == * direction: ** left-to-right * common-name: ** bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) * ec-number: ** [http://enz...")
(Created page with "Category:reaction == Reaction HOMSUCTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46] == Reaction formula == * 1...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.6.1.17-RXN ==
+
== Reaction HOMSUCTRAN-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.6.1.17 ec-3.6.1.17]
+
** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPD-609]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[GTP]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ07337]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR100741
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22484 22484]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22009 22009]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01232 R01232]
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** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P50583 P50583]
+
** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
** [http://www.uniprot.org/uniprot/P49776 P49776]
+
** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
** [http://www.uniprot.org/uniprot/O24005 O24005]
+
** [http://www.uniprot.org/uniprot/P07623 P07623]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)}}
+
{{#set: ec-number=ec-2.3.1.46}}
{{#set: ec-number=ec-3.6.1.17}}
+
{{#set: nb gene associated=0}}
{{#set: nb gene associated=1}}
+
{{#set: nb pathway associated=1}}
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
{{#set: reconstruction source=saccharina_japonica_genome}}
 

Latest revision as of 11:25, 18 March 2021

Reaction HOMSUCTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links