Difference between revisions of "HOMSUCTRAN-RXN"

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(Created page with "Category:reaction == Reaction RXN-18202 == * direction: ** reversible == Reaction formula == * 1 CPDQT-39[c] '''+''' 1 NAD[c] '''<=>''' 1 CPD-19488[c] '''+'''...")
(Created page with "Category:reaction == Reaction HOMSUCTRAN-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46] == Reaction formula == * 1...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-18202 ==
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== Reaction HOMSUCTRAN-RXN ==
 
* direction:
 
* direction:
** reversible
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** left-to-right
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.3.1.46 ec-2.3.1.46]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CPDQT-39]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[CPD-19488]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[HOMO-SER]][c] '''+''' 1 [[SUC-COA]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21291]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWYQT-4450]], aliphatic glucosinolate biosynthesis, side chain elongation cycle:
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
** '''5''' reactions found over '''30''' reactions in the full pathway
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** '''4''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
{{#set: direction=reversible}}
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* METANETX-RXN : MNXR100741
{{#set: nb gene associated=1}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22009 22009]
 +
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01777 R01777]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9PLV2 Q9PLV2]
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** [http://www.uniprot.org/uniprot/Q9CEC5 Q9CEC5]
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** [http://www.uniprot.org/uniprot/P07623 P07623]
 +
{{#set: direction=left-to-right}}
 +
{{#set: ec-number=ec-2.3.1.46}}
 +
{{#set: nb gene associated=0}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=gap-filling}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=meneco}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added for gapfilling}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}

Latest revision as of 11:25, 18 March 2021

Reaction HOMSUCTRAN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links