Difference between revisions of "HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN"

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(Created page with "Category:reaction == Reaction 2.1.1.125-RXN == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.1.1.321 ec-2.1.1.321] == Reaction formula == *...")
(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN == * direction: ** left-to-right * common-name: ** hydroxymethylglutaryl-coa lyase * ec-number: ** [http:...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 2.1.1.125-RXN ==
+
== Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** hydroxymethylglutaryl-coa lyase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.1.1.321 ec-2.1.1.321]
+
** [http://enzyme.expasy.org/EC/4.1.3.4 ec-4.1.3.4]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Histone-L-arginines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[Histone-N-o-methyl-arginines]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[ACETYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ16975]]
+
* Gene: [[SJ21564]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[SJ15815]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[LEU-DEG2-PWY]], L-leucine degradation I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY66-367]], ketogenesis:
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5074]], mevalonate degradation:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR106950
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24405 24405]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R04718 R04718]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P35914 P35914]
 +
** [http://www.uniprot.org/uniprot/P35915 P35915]
 +
** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: ec-number=ec-2.1.1.321}}
+
{{#set: common-name=hydroxymethylglutaryl-coa lyase}}
{{#set: nb gene associated=2}}
+
{{#set: ec-number=ec-4.1.3.4}}
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: nb pathway associated=3}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • hydroxymethylglutaryl-coa lyase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • LEU-DEG2-PWY, L-leucine degradation I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY66-367, ketogenesis:
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5074, mevalonate degradation:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links