Difference between revisions of "ITCY"

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(Created page with "Category:reaction == Reaction RXN1G-488 == * direction: ** left-to-right * common-name: ** trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific) ** tran...")
(Created page with "Category:reaction == Reaction RXN-11357 == * direction: ** left-to-right * common-name: ** 9,9′-dicis-ζ-carotene desaturase ** 7,9,9'-cis-neurosporene desaturas...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN1G-488 ==
+
== Reaction RXN-11357 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)
+
** 9,9′-dicis-ζ-carotene desaturase
** trans-docos-2-enoyl-[acyl-carrier protein] reductase
+
** 7,9,9'-cis-neurosporene desaturase
* ec-number:
+
* synonymous:
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
+
** ζ-carotene desaturase
 +
** zds
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[trans-delta2-behenoyl-ACPs]][c] '''=>''' 1 [[Behenoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
+
* 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD-7496]][c] '''+''' 1 [[ETR-Quinols]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ00320]]
+
* Gene: [[SJ05680]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ03883]]
+
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ05681]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWYG-321]], mycolate biosynthesis:
+
* [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
** '''26''' reactions found over '''182''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30964 30964]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)|trans-docos-2-enoyl-[acyl-carrier protein] reductase}}
+
{{#set: common-name=9,9′-dicis-ζ-carotene desaturase|7,9,9'-cis-neurosporene desaturase}}
{{#set: ec-number=ec-1.3.1.9}}
+
{{#set: synonymous=zds|ζ-carotene desaturase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}

Revision as of 19:03, 14 January 2021

Reaction RXN-11357

  • direction:
    • left-to-right
  • common-name:
    • 9,9′-dicis-ζ-carotene desaturase
    • 7,9,9'-cis-neurosporene desaturase
  • synonymous:
    • ζ-carotene desaturase
    • zds

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links