Difference between revisions of "ITCY"
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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16030 RXN-16030] == * direction: ** reversible * common-name: ** phosphatidate phosphatase * ec...") |
(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] == * direction: ** left-to-right * common-name: ** 9,9′-dicis-ζ-car...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11357 RXN-11357] == |
* direction: | * direction: | ||
| − | ** | + | ** left-to-right |
* common-name: | * common-name: | ||
| − | ** | + | ** 9,9′-dicis-ζ-carotene desaturase |
| − | * | + | ** 7,9,9'-cis-neurosporene desaturase |
| − | ** | + | * synonymous: |
| + | ** ζ-carotene desaturase | ||
| + | ** zds | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[CPD- | + | * 1 [[CPD-7524]][c] '''+''' 1 [[ETR-Quinones]][c] '''=>''' 1 [[CPD-7496]][c] '''+''' 1 [[ETR-Quinols]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ05680]] |
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| − | |||
| − | |||
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | ** Category: [[orthology]] |
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[SJ05681]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-6475]], trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6475 PWY-6475] | ||
| + | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| − | {{#set: direction= | + | * RHEA: |
| − | {{#set: common-name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30964 30964] |
| − | {{#set: | + | {{#set: direction=left-to-right}} |
| − | {{#set: nb gene associated= | + | {{#set: common-name=7,9,9'-cis-neurosporene desaturase|9,9′-dicis-ζ-carotene desaturase}} |
| − | {{#set: nb pathway associated= | + | {{#set: synonymous=ζ-carotene desaturase|zds}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: nb gene associated=2}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: nb pathway associated=1}} |
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 14:28, 26 August 2019
Contents
Reaction RXN-11357
- direction:
- left-to-right
- common-name:
- 9,9′-dicis-ζ-carotene desaturase
- 7,9,9'-cis-neurosporene desaturase
- synonymous:
- ζ-carotene desaturase
- zds
Reaction formula
- 1 CPD-7524[c] + 1 ETR-Quinones[c] => 1 CPD-7496[c] + 1 ETR-Quinols[c]
Gene(s) associated with this reaction
- Gene: SJ05680
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05681
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6475, trans-lycopene biosynthesis II (oxygenic phototrophs and green sulfur bacteria): PWY-6475
- 8 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
- RHEA:
