Difference between revisions of "ITCY"

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(Created page with "Category:reaction == Reaction 1.6.4.4-RXN == * direction: ** reversible * common-name: ** protein-disulfide reductase * ec-number: ** [http://enzyme.expasy.org/EC/1.8.1.8...")
(Created page with "Category:reaction == Reaction RXN1G-488 == * direction: ** left-to-right * common-name: ** trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific) ** tran...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 1.6.4.4-RXN ==
+
== Reaction RXN1G-488 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** protein-disulfide reductase
+
** trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)
 +
** trans-docos-2-enoyl-[acyl-carrier protein] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.8.1.8 ec-1.8.1.8]
+
** [http://enzyme.expasy.org/EC/1.3.1.9 ec-1.3.1.9]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[Protein-Dithiols]][c] '''<=>''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Protein-Disulfides]][c]
+
* 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[trans-delta2-behenoyl-ACPs]][c] '''=>''' 1 [[Behenoyl-ACPs]][c] '''+''' 1 [[NAD]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[SJ00320]]
−
* Gene: [[SJ09093]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ16658]]
+
* Gene: [[SJ03883]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ12278]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ03044]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ01778]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00931]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ08960]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ06874]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ00760]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWYG-321]], mycolate biosynthesis:
 +
** '''26''' reactions found over '''182''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: direction=left-to-right}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03914 R03914]
+
{{#set: common-name=trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)|trans-docos-2-enoyl-[acyl-carrier protein] reductase}}
−
{{#set: direction=reversible}}
+
{{#set: ec-number=ec-1.3.1.9}}
−
{{#set: common-name=protein-disulfide reductase}}
+
{{#set: nb gene associated=2}}
−
{{#set: ec-number=ec-1.8.1.8}}
+
{{#set: nb pathway associated=1}}
−
{{#set: nb gene associated=9}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 13:16, 14 January 2021

Reaction RXN1G-488

  • direction:
    • left-to-right
  • common-name:
    • trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)
    • trans-docos-2-enoyl-[acyl-carrier protein] reductase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYG-321, mycolate biosynthesis:
    • 26 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "trans-docos-2-enoyl-[acyl-carrier protein] reductase (nadph, b-specific)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "trans-docos-2-enoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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