Difference between revisions of "KETOACYLCOATHIOL-RXN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-10060 == * direction: ** left-to-right * common-name: ** 3-oxocerotoyl-[acp] reductase ** 3-oxoacyl-[acyl-carrier-protein] reductase (nad...")
(Created page with "Category:reaction == Reaction KETOACYLCOATHIOL-RXN == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase ** 3-ketoacyl-coa thiolase * ec-number:...")
 
(4 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-10060 ==
+
== Reaction KETOACYLCOATHIOL-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** 3-oxocerotoyl-[acp] reductase
+
** acetyl-coa c-acyltransferase
** 3-oxoacyl-[acyl-carrier-protein] reductase (nadph)
+
** 3-ketoacyl-coa thiolase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
+
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
 +
* synonymous:
 +
** beta-ketothiolase
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-oxo-cerotoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxycerotoyl-ACPs]][c]
+
* 1 [[3-KETOACYL-COA]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17743]]
+
* Gene: [[SJ21818]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ04229]]
+
* Gene: [[SJ16470]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ21817]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ13014]]
+
* Gene: [[SJ14898]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ09371]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6113]], superpathway of mycolate biosynthesis:
+
* [[PWY-7288]], fatty acid β-oxidation VII (yeast peroxisome):
** '''8''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
* [[PWYG-321]], mycolate biosynthesis:
+
* [[PWY-5136]], fatty acid β-oxidation II (plant peroxisome):
** '''26''' reactions found over '''182''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[FAO-PWY]], fatty acid β-oxidation I (generic):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-391]], fatty acid β-oxidation VI (mammalian peroxisome):
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR115993
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21566 21566]
 +
* PIR:
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAB XURTAB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURTAA XURTAA]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XURT XURT]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUHUAB XUHUAB]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=XUEC XUEC]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52165 T52165]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52110 T52110]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T07989 T07989]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S72532 S72532]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S57792 S57792]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S36838 S36838]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S33637 S33637]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S22784 S22784]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JS0624 JS0624]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=H64890 H64890]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P77525 P77525]
 +
** [http://www.uniprot.org/uniprot/P28790 P28790]
 +
** [http://www.uniprot.org/uniprot/P27796 P27796]
 +
** [http://www.uniprot.org/uniprot/Q08375 Q08375]
 +
** [http://www.uniprot.org/uniprot/Q05493 Q05493]
 +
** [http://www.uniprot.org/uniprot/Q42918 Q42918]
 +
** [http://www.uniprot.org/uniprot/Q43742 Q43742]
 +
** [http://www.uniprot.org/uniprot/Q56WD9 Q56WD9]
 +
** [http://www.uniprot.org/uniprot/Q570C8 Q570C8]
 +
** [http://www.uniprot.org/uniprot/P21151 P21151]
 +
** [http://www.uniprot.org/uniprot/P09110 P09110]
 +
** [http://www.uniprot.org/uniprot/P13437 P13437]
 +
** [http://www.uniprot.org/uniprot/P21775 P21775]
 +
** [http://www.uniprot.org/uniprot/P07871 P07871]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00391 R00391]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=3-oxocerotoyl-[acp] reductase|3-oxoacyl-[acyl-carrier-protein] reductase (nadph)}}
+
{{#set: common-name=acetyl-coa c-acyltransferase|3-ketoacyl-coa thiolase}}
{{#set: ec-number=ec-1.1.1.100}}
+
{{#set: ec-number=ec-2.3.1.16}}
{{#set: nb gene associated=3}}
+
{{#set: synonymous=beta-ketothiolase}}
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=5}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=4}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:24, 18 March 2021

Reaction KETOACYLCOATHIOL-RXN

  • direction:
    • left-to-right
  • common-name:
    • acetyl-coa c-acyltransferase
    • 3-ketoacyl-coa thiolase
  • ec-number:
  • synonymous:
    • beta-ketothiolase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7288, fatty acid β-oxidation VII (yeast peroxisome):
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5136, fatty acid β-oxidation II (plant peroxisome):
    • 5 reactions found over 5 reactions in the full pathway
  • FAO-PWY, fatty acid β-oxidation I (generic):
    • 6 reactions found over 7 reactions in the full pathway
  • PWY66-391, fatty acid β-oxidation VI (mammalian peroxisome):
    • 6 reactions found over 7 reactions in the full pathway

Reconstruction information

External links