Difference between revisions of "KETOISOCAPROATE-RXN"
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(Created page with "Category:reaction == Reaction 3.6.3.8-RXN == * direction: ** left-to-right * common-name: ** calcium-transporting atpase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.3...") |
(Created page with "Category:reaction == Reaction RXN-13441 == * direction: ** left-to-right * common-name: ** 3-oxo-icosatrienoyl-coa synthase * ec-number: ** [http://enzyme.expasy.org/EC/2....") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN-13441 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** 3-oxo-icosatrienoyl-coa synthase |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/3. | + | ** [http://enzyme.expasy.org/EC/2.3.1.199 ec-2.3.1.199] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[LINOLENOYL-COA]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-14422]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | + | * Gene: [[SJ11672]] | |
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| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ19629]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ06616]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | * Gene: [[ | + | * Gene: [[SJ00613]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| − | |||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWY-7724]], icosapentaenoate biosynthesis III (8-desaturase, mammals): | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7619]], juniperonate biosynthesis: | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7602]], icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes): | ||
| + | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=3-oxo-icosatrienoyl-coa synthase}} |
| − | {{#set: ec-number=ec-3. | + | {{#set: ec-number=ec-2.3.1.199}} |
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome}} | {{#set: reconstruction source=saccharina_japonica_genome}} | ||
Revision as of 11:25, 15 January 2021
Contents
Reaction RXN-13441
- direction:
- left-to-right
- common-name:
- 3-oxo-icosatrienoyl-coa synthase
- ec-number:
Reaction formula
- 1 LINOLENOYL-COA[c] + 1 MALONYL-COA[c] + 1 PROTON[c] => 1 CARBON-DIOXIDE[c] + 1 CO-A[c] + 1 CPD-14422[c]
Gene(s) associated with this reaction
- Gene: SJ11672
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ19629
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ06616
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ00613
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-7724, icosapentaenoate biosynthesis III (8-desaturase, mammals):
- 4 reactions found over 7 reactions in the full pathway
- PWY-7619, juniperonate biosynthesis:
- 3 reactions found over 5 reactions in the full pathway
- PWY-7602, icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes):
- 4 reactions found over 7 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
