Difference between revisions of "KETOISOCAPROATE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEPHOSPHOCOAKIN-RXN DEPHOSPHOCOAKIN-RXN] == * direction: ** left-to-right * common-name: ** dephosp...")
(Created page with "Category:reaction == Reaction KETOISOCAPROATE-RXN == * direction: ** left-to-right * common-name: ** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide) * ec-number: ** [ht...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DEPHOSPHOCOAKIN-RXN DEPHOSPHOCOAKIN-RXN] ==
+
== Reaction KETOISOCAPROATE-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
** dephospho-coa kinase
+
** 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.1.24 ec-2.7.1.24]
+
** [http://enzyme.expasy.org/EC/1.2.4.4 ec-1.2.4.4]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[DEPHOSPHO-COA]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[BCAA-dehydrogenase-3MB-DH-lipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ20645]]
+
* Gene: [[SJ11017]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
* Gene: [[SJ10598]]
+
* Gene: [[SJ18449]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[COA-PWY]], coenzyme A biosynthesis I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=COA-PWY COA-PWY]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7851]], coenzyme A biosynthesis II (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7851 PWY-7851]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18246 18246]
+
* METANETX-RXN : MNXR115997
* LIGAND-RXN:
+
* UNIPROT:
** [http://www.genome.jp/dbget-bin/www_bget?R00130 R00130]
+
** [http://www.uniprot.org/uniprot/P21839 P21839]
 +
** [http://www.uniprot.org/uniprot/P21953 P21953]
 +
** [http://www.uniprot.org/uniprot/P37940 P37940]
 +
** [http://www.uniprot.org/uniprot/Q9PK54 Q9PK54]
 +
** [http://www.uniprot.org/uniprot/P37941 P37941]
 +
** [http://www.uniprot.org/uniprot/P11178 P11178]
 +
** [http://www.uniprot.org/uniprot/P12694 P12694]
 +
** [http://www.uniprot.org/uniprot/P09061 P09061]
 +
** [http://www.uniprot.org/uniprot/P09060 P09060]
 +
** [http://www.uniprot.org/uniprot/P11960 P11960]
 +
** [http://www.uniprot.org/uniprot/O84344 O84344]
 +
** [http://www.uniprot.org/uniprot/Q9Z9E8 Q9Z9E8]
 +
** [http://www.uniprot.org/uniprot/Q9I1M2 Q9I1M2]
 +
** [http://www.uniprot.org/uniprot/P35738 P35738]
 +
** [http://www.uniprot.org/uniprot/P50136 P50136]
 +
** [http://www.uniprot.org/uniprot/O48615 O48615]
 +
** [http://www.uniprot.org/uniprot/O03849 O03849]
 +
** [http://www.uniprot.org/uniprot/Q53592 Q53592]
 +
** [http://www.uniprot.org/uniprot/Q53593 Q53593]
 +
** [http://www.uniprot.org/uniprot/O82450 O82450]
 +
</div>
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=dephospho-coa kinase}}
+
{{#set: common-name=4-methyl-2-oxopentanoate dehydrogenase (lipoamide)}}
{{#set: ec-number=ec-2.7.1.24}}
+
{{#set: ec-number=ec-1.2.4.4}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction KETOISOCAPROATE-RXN

  • direction:
    • left-to-right
  • common-name:
    • 4-methyl-2-oxopentanoate dehydrogenase (lipoamide)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links