Difference between revisions of "L-ASPARTATE-OXID-RXN"

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(Created page with "Category:reaction == Reaction 4.3.1.17-RXN == * direction: ** left-to-right * common-name: ** l-serine ammonia-lyase * ec-number: ** [http://enzyme.expasy.org/EC/4.3.1.17...")
(Created page with "Category:reaction == Reaction L-ASPARTATE-OXID-RXN == * direction: ** left-to-right * common-name: ** l-aspartate oxidase * ec-number: ** [http://enzyme.expasy.org/EC/1.4....")
 
(3 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 4.3.1.17-RXN ==
+
== Reaction L-ASPARTATE-OXID-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** l-serine ammonia-lyase
+
** l-aspartate oxidase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.3.1.17 ec-4.3.1.17]
+
** [http://enzyme.expasy.org/EC/1.4.3.16 ec-1.4.3.16]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[SER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[L-ASPARTATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[IMINOASPARTATE]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15468]]
+
* Gene: [[SJ19480]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ08066]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PYRIDNUCSYN-PWY]], NAD de novo biosynthesis I (from aspartate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5316]], nicotine biosynthesis:
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7342]], superpathway of nicotine biosynthesis:
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR96094
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19170 19170]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25877 25877]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00220 R00220]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00481 R00481]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q7M194 Q7M194]
 
−
** [http://www.uniprot.org/uniprot/P30744 P30744]
 
−
** [http://www.uniprot.org/uniprot/Q9JX54 Q9JX54]
 
−
** [http://www.uniprot.org/uniprot/P56072 P56072]
 
−
** [http://www.uniprot.org/uniprot/P25379 P25379]
 
−
** [http://www.uniprot.org/uniprot/P16095 P16095]
 
−
** [http://www.uniprot.org/uniprot/P20132 P20132]
 
−
** [http://www.uniprot.org/uniprot/P09367 P09367]
 
−
** [http://www.uniprot.org/uniprot/Q9PM51 Q9PM51]
 
−
** [http://www.uniprot.org/uniprot/P17324 P17324]
 
−
** [http://www.uniprot.org/uniprot/P80212 P80212]
 
−
** [http://www.uniprot.org/uniprot/P80213 P80213]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=l-serine ammonia-lyase}}
+
{{#set: common-name=l-aspartate oxidase}}
−
{{#set: ec-number=ec-4.3.1.17}}
+
{{#set: ec-number=ec-1.4.3.16}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:25, 18 March 2021

Reaction L-ASPARTATE-OXID-RXN

  • direction:
    • left-to-right
  • common-name:
    • l-aspartate oxidase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PYRIDNUCSYN-PWY, NAD de novo biosynthesis I (from aspartate):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5316, nicotine biosynthesis:
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7342, superpathway of nicotine biosynthesis:
    • 4 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR96094
  • RHEA:
  • LIGAND-RXN:





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