Difference between revisions of "MALTODEXGLUCOSID-RXN"

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(Created page with "Category:reaction == Reaction ALPHAGALACTOSID-RXN == * direction: ** left-to-right * common-name: ** alpha-galactosidase * ec-number: ** [http://enzyme.expasy.org/EC/3.2.1...")
(Created page with "Category:reaction == Reaction RXN-1126 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12] == Reaction formula == * 1 ATP...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALPHAGALACTOSID-RXN ==
+
== Reaction RXN-1126 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** alpha-galactosidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.22 ec-3.2.1.22]
+
** [http://enzyme.expasy.org/EC/6.2.1.12 ec-6.2.1.12]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[MELIBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-galactopyranose]][c] '''+''' 1 [[Glucopyranose]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-676]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ03511]]
+
* Gene: [[SJ03066]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ02145]]
+
* Gene: [[SJ16901]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ02144]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ05258]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY0-1301]], melibiose degradation:
+
* [[PWY-7398]], coumarins biosynthesis (engineered):
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-6673]], caffeoylglucarate biosynthesis:
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis:
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=36300 36300]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01101 R01101]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28663 28663]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P16551 P16551]
 
−
** [http://www.uniprot.org/uniprot/P27756 P27756]
 
−
** [http://www.uniprot.org/uniprot/P04824 P04824]
 
−
** [http://www.uniprot.org/uniprot/P06720 P06720]
 
−
** [http://www.uniprot.org/uniprot/P06280 P06280]
 
−
** [http://www.uniprot.org/uniprot/P51569 P51569]
 
−
** [http://www.uniprot.org/uniprot/O93816 O93816]
 
−
** [http://www.uniprot.org/uniprot/Q03647 Q03647]
 
−
** [http://www.uniprot.org/uniprot/P14749 P14749]
 
−
** [http://www.uniprot.org/uniprot/P28351 P28351]
 
−
** [http://www.uniprot.org/uniprot/P43467 P43467]
 
−
** [http://www.uniprot.org/uniprot/Q99172 Q99172]
 
−
** [http://www.uniprot.org/uniprot/P41945 P41945]
 
−
** [http://www.uniprot.org/uniprot/P41946 P41946]
 
−
** [http://www.uniprot.org/uniprot/P41947 P41947]
 
−
** [http://www.uniprot.org/uniprot/Q92457 Q92457]
 
−
** [http://www.uniprot.org/uniprot/Q92456 Q92456]
 
−
** [http://www.uniprot.org/uniprot/Q92451 Q92451]
 
−
** [http://www.uniprot.org/uniprot/O04943 O04943]
 
−
** [http://www.uniprot.org/uniprot/O04944 O04944]
 
−
** [http://www.uniprot.org/uniprot/Q39811 Q39811]
 
−
** [http://www.uniprot.org/uniprot/Q41100 Q41100]
 
−
** [http://www.uniprot.org/uniprot/Q42656 Q42656]
 
−
</div>
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=alpha-galactosidase}}
+
{{#set: ec-number=ec-6.2.1.12}}
−
{{#set: ec-number=ec-3.2.1.22}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}

Revision as of 19:07, 14 January 2021

Reaction RXN-1126

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7398, coumarins biosynthesis (engineered):
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis:
    • 9 reactions found over 19 reactions in the full pathway

Reconstruction information

External links





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