Difference between revisions of "METHYLACYLYLCOA-HYDROXY-RXN"

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(Created page with "Category:reaction == Reaction H2NEOPTERINALDOL-RXN == * direction: ** left-to-right * common-name: ** dihydroneopterin aldolase * ec-number: ** [http://enzyme.expasy.org/E...")
(Created page with "Category:reaction == Reaction METHYLACYLYLCOA-HYDROXY-RXN == * direction: ** reversible * common-name: ** methylacrylyl-coa hydratase ** 3-hydroxy-isobutyryl-coa hydro-lya...")
 
(6 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction H2NEOPTERINALDOL-RXN ==
+
== Reaction METHYLACYLYLCOA-HYDROXY-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
 
* common-name:
 
* common-name:
** dihydroneopterin aldolase
+
** methylacrylyl-coa hydratase
 +
** 3-hydroxy-isobutyryl-coa hydro-lyase
 +
** enoyl-coa hydratase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.2.25 ec-4.1.2.25]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 ec-4.2.1.17]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DIHYDRO-NEO-PTERIN]][c] '''=>''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''+''' 1 [[GLYCOLALDEHYDE]][c]
+
* 1 [[CPD-12173]][c] '''<=>''' 1 [[METHACRYLYL-COA]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ22398]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ03913]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ07211]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03584]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ10275]]
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ14591]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (Methanocaldococcus):
+
* [[VALDEG-PWY]], L-valine degradation I:
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
 
** '''2''' reactions found over '''14''' reactions in the full pathway
 
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I:
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia):
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR138263
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10541 10541]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31178 31178]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R03504 R03504]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04224 R04224]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P22291 P22291]
+
** [http://www.uniprot.org/uniprot/P21177 P21177]
** [http://www.uniprot.org/uniprot/Q9CGE4 Q9CGE4]
+
** [http://www.uniprot.org/uniprot/Q08426 Q08426]
** [http://www.uniprot.org/uniprot/Q9JUL3 Q9JUL3]
+
** [http://www.uniprot.org/uniprot/O29814 O29814]
** [http://www.uniprot.org/uniprot/P28823 P28823]
+
** [http://www.uniprot.org/uniprot/O29299 O29299]
** [http://www.uniprot.org/uniprot/P29251 P29251]
+
** [http://www.uniprot.org/uniprot/O34893 O34893]
** [http://www.uniprot.org/uniprot/P53848 P53848]
+
** [http://www.uniprot.org/uniprot/O23520 O23520]
** [http://www.uniprot.org/uniprot/O75013 O75013]
+
** [http://www.uniprot.org/uniprot/P76082 P76082]
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P64016 P64016]
{{#set: common-name=dihydroneopterin aldolase}}
+
** [http://www.uniprot.org/uniprot/P07896 P07896]
{{#set: ec-number=ec-4.1.2.25}}
+
** [http://www.uniprot.org/uniprot/O53419 O53419]
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/P94549 P94549]
{{#set: nb pathway associated=4}}
+
** [http://www.uniprot.org/uniprot/Q13825 Q13825]
{{#set: reconstruction category=annotation}}
+
** [http://www.uniprot.org/uniprot/P45361 P45361]
{{#set: reconstruction tool=pathwaytools}}
+
** [http://www.uniprot.org/uniprot/P28793 P28793]
 +
** [http://www.uniprot.org/uniprot/P14604 P14604]
 +
** [http://www.uniprot.org/uniprot/P22414 P22414]
 +
** [http://www.uniprot.org/uniprot/Q7M0E0 Q7M0E0]
 +
** [http://www.uniprot.org/uniprot/P34559 P34559]
 +
** [http://www.uniprot.org/uniprot/Q01373 Q01373]
 +
** [http://www.uniprot.org/uniprot/P55100 P55100]
 +
** [http://www.uniprot.org/uniprot/P53526 P53526]
 +
** [http://www.uniprot.org/uniprot/Q39659 Q39659]
 +
** [http://www.uniprot.org/uniprot/O52797 O52797]
 +
</div>
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=3-hydroxy-isobutyryl-coa hydro-lyase|methylacrylyl-coa hydratase|enoyl-coa hydratase}}
 +
{{#set: ec-number=ec-4.2.1.17}}
 +
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction METHYLACYLYLCOA-HYDROXY-RXN

  • direction:
    • reversible
  • common-name:
    • methylacrylyl-coa hydratase
    • 3-hydroxy-isobutyryl-coa hydro-lyase
    • enoyl-coa hydratase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • VALDEG-PWY, L-valine degradation I:
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links