Difference between revisions of "MTHFO LPAREN nadp RPAREN"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction SULFATE-ADENYLYLTRANS-RXN == * direction: ** reversible * common-name: ** sulfate adenylyltransferase * ec-number: ** [http://enzyme.expasy.o...")
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * direction: ** left-to-right * common-name: ** acetate-coa ligase ** acetyl-coa synthetase (amp-forming) * ec-num...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction SULFATE-ADENYLYLTRANS-RXN ==
+
== Reaction ACETATE--COA-LIGASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** sulfate adenylyltransferase
+
** acetate-coa ligase
 +
** acetyl-coa synthetase (amp-forming)
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.7.7.4 ec-2.7.7.4]
+
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SULFATE]][c] '''<=>''' 1 [[APS]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09890]]
+
* Gene: [[SJ08601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ04851]]
+
* Gene: [[SJ16901]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[DISSULFRED-PWY]], dissimilatory sulfate reduction I (to hydrogen sufide)):
+
* [[PWY66-161]], ethanol degradation III:
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[P224-PWY]], dissimilatory sulfate reduction II (to thiosulfate):
+
* [[PWY-7118]], chitin deacetylation:
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6683]], assimilatory sulfate reduction III:
+
* [[PWY66-162]], ethanol degradation IV:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[SULFMETII-PWY]], assimilatory sulfate reduction II:
+
* [[PWY0-1313]], acetate conversion to acetyl-CoA:
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6672]], cis-geranyl-CoA degradation:
 +
** '''4''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY66-21]], ethanol degradation II:
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5340]], sulfate activation for sulfonation:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5278]], sulfite oxidation III:
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR95413
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18136 18136]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00529 R00529]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q12650 Q12650]
+
** [http://www.uniprot.org/uniprot/P27095 P27095]
−
** [http://www.uniprot.org/uniprot/O33581 O33581]
+
** [http://www.uniprot.org/uniprot/P31638 P31638]
−
** [http://www.uniprot.org/uniprot/O34764 O34764]
+
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
−
** [http://www.uniprot.org/uniprot/Q10600 Q10600]
+
** [http://www.uniprot.org/uniprot/P28812 P28812]
−
** [http://www.uniprot.org/uniprot/O67174 O67174]
+
** [http://www.uniprot.org/uniprot/P27550 P27550]
−
** [http://www.uniprot.org/uniprot/P21156 P21156]
+
** [http://www.uniprot.org/uniprot/O34613 O34613]
−
** [http://www.uniprot.org/uniprot/O23324 O23324]
+
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
−
** [http://www.uniprot.org/uniprot/Q9JUD7 Q9JUD7]
+
** [http://www.uniprot.org/uniprot/P36333 P36333]
−
** [http://www.uniprot.org/uniprot/Q9PM66 Q9PM66]
+
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
−
** [http://www.uniprot.org/uniprot/Q9JUD6 Q9JUD6]
+
** [http://www.uniprot.org/uniprot/P39062 P39062]
−
** [http://www.uniprot.org/uniprot/P28604 P28604]
+
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
−
** [http://www.uniprot.org/uniprot/Q27128 Q27128]
+
** [http://www.uniprot.org/uniprot/P52910 P52910]
−
** [http://www.uniprot.org/uniprot/P23845 P23845]
+
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
−
** [http://www.uniprot.org/uniprot/O43252 O43252]
+
** [http://www.uniprot.org/uniprot/P16928 P16928]
−
** [http://www.uniprot.org/uniprot/Q43170 Q43170]
+
** [http://www.uniprot.org/uniprot/P16929 P16929]
−
** [http://www.uniprot.org/uniprot/Q43183 Q43183]
+
** [http://www.uniprot.org/uniprot/O68040 O68040]
−
** [http://www.uniprot.org/uniprot/Q43870 Q43870]
+
** [http://www.uniprot.org/uniprot/P78773 P78773]
−
** [http://www.uniprot.org/uniprot/Q12555 Q12555]
 
−
** [http://www.uniprot.org/uniprot/P08536 P08536]
 
−
** [http://www.uniprot.org/uniprot/P74241 P74241]
 
−
** [http://www.uniprot.org/uniprot/O48888 O48888]
 
−
** [http://www.uniprot.org/uniprot/Q39595 Q39595]
 
−
** [http://www.uniprot.org/uniprot/Q96349 Q96349]
 
−
** [http://www.uniprot.org/uniprot/Q96541 Q96541]
 
−
** [http://www.uniprot.org/uniprot/Q9S7D8 Q9S7D8]
 
−
** [http://www.uniprot.org/uniprot/P13441 P13441]
 
−
** [http://www.uniprot.org/uniprot/P13442 P13442]
 
 
</div>
 
</div>
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=sulfate adenylyltransferase}}
+
{{#set: common-name=acetyl-coa synthetase (amp-forming)|acetate-coa ligase}}
−
{{#set: ec-number=ec-2.7.7.4}}
+
{{#set: ec-number=ec-6.2.1.1}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=6}}
 
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|saccharina_japonica_genome}}

Revision as of 08:40, 15 March 2021

Reaction ACETATE--COA-LIGASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • acetate-coa ligase
    • acetyl-coa synthetase (amp-forming)
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-161, ethanol degradation III:
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7118, chitin deacetylation:
    • 5 reactions found over 4 reactions in the full pathway
  • PWY66-162, ethanol degradation IV:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1313, acetate conversion to acetyl-CoA:
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-6672, cis-geranyl-CoA degradation:
    • 4 reactions found over 9 reactions in the full pathway
  • PWY66-21, ethanol degradation II:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=MTHFO_LPAREN_nadp_RPAREN&oldid=130164"