Difference between revisions of "NADPYROPHOSPHAT-RXN"

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(Created page with "Category:reaction == Reaction AMP-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** amp deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3...")
(Created page with "Category:reaction == Reaction NADPYROPHOSPHAT-RXN == * direction: ** left-to-right * common-name: ** nad+ diphosphatase * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1....")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMP-DEAMINASE-RXN ==
+
== Reaction NADPYROPHOSPHAT-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** amp deaminase
+
** nad+ diphosphatase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3.5.4.17]
+
** [http://enzyme.expasy.org/EC/3.6.1.22 ec-3.6.1.22]
−
** [http://enzyme.expasy.org/EC/3.5.4.6 ec-3.5.4.6]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[IMP]][c]
+
* 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[NICOTINAMIDE_NUCLEOTIDE]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ10996]]
+
* Gene: [[SJ22529]]
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[SJ15115]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6596]], adenosine nucleotides degradation I:
+
* [[NAD-BIOSYNTHESIS-II]], NAD salvage pathway III (to nicotinamide riboside):
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7761]], NAD salvage pathway II (PNC IV cycle):
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5381]], NAD salvage (plants):
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 +
* [[PYRIDNUCSAL-PWY]], NAD salvage pathway I (PNC VI cycle):
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* METANETX-RXN : MNXR101861
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14778 14778]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11801 11801]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00103 R00103]
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P10759 P10759]
 
−
** [http://www.uniprot.org/uniprot/Q02356 Q02356]
 
−
** [http://www.uniprot.org/uniprot/P23109 P23109]
 
−
** [http://www.uniprot.org/uniprot/P15274 P15274]
 
−
** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8]
 
−
** [http://www.uniprot.org/uniprot/Q01433 Q01433]
 
−
** [http://www.uniprot.org/uniprot/Q01432 Q01432]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=amp deaminase}}
+
{{#set: common-name=nad+ diphosphatase}}
−
{{#set: ec-number=ec-3.5.4.17|ec-3.5.4.6}}
+
{{#set: ec-number=ec-3.6.1.22}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Latest revision as of 11:22, 18 March 2021

Reaction NADPYROPHOSPHAT-RXN

  • direction:
    • left-to-right
  • common-name:
    • nad+ diphosphatase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • NAD-BIOSYNTHESIS-II, NAD salvage pathway III (to nicotinamide riboside):
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-7761, NAD salvage pathway II (PNC IV cycle):
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-5381, NAD salvage (plants):
    • 6 reactions found over 11 reactions in the full pathway
  • PYRIDNUCSAL-PWY, NAD salvage pathway I (PNC VI cycle):
    • 4 reactions found over 7 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR101861
  • RHEA:
  • LIGAND-RXN:





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