Difference between revisions of "NADPYROPHOSPHAT-RXN"
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(Created page with "Category:reaction == Reaction RXN3O-5293 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/E...") |
(Created page with "Category:reaction == Reaction AMP-DEAMINASE-RXN == * direction: ** left-to-right * common-name: ** amp deaminase * ec-number: ** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction AMP-DEAMINASE-RXN == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
| + | * common-name: | ||
| + | ** amp deaminase | ||
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.4.17 ec-3.5.4.17] |
| − | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/3.5.4.6 ec-3.5.4.6] |
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[IMP]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ10996]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** Source: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | * Gene: [[ | + | * Gene: [[SJ15115]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[ | + | * [[PWY-6596]], adenosine nucleotides degradation I: |
| − | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14778 14778] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181] | ||
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P10759 P10759] | ||
| + | ** [http://www.uniprot.org/uniprot/Q02356 Q02356] | ||
| + | ** [http://www.uniprot.org/uniprot/P23109 P23109] | ||
| + | ** [http://www.uniprot.org/uniprot/P15274 P15274] | ||
| + | ** [http://www.uniprot.org/uniprot/Q7M3H8 Q7M3H8] | ||
| + | ** [http://www.uniprot.org/uniprot/Q01433 Q01433] | ||
| + | ** [http://www.uniprot.org/uniprot/Q01432 Q01432] | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: ec-number=ec- | + | {{#set: common-name=amp deaminase}} |
| + | {{#set: ec-number=ec-3.5.4.17|ec-3.5.4.6}} | ||
{{#set: nb gene associated=2}} | {{#set: nb gene associated=2}} | ||
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=annotation|orthology}} |
| − | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 15:35, 5 January 2021
Contents
Reaction AMP-DEAMINASE-RXN
- direction:
- left-to-right
- common-name:
- amp deaminase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ10996
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: SJ15115
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6596, adenosine nucleotides degradation I:
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
