Difference between revisions of "NARINGENIN-CHALCONE-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLTRANSFER-RXN N-ACETYLTRANSFER-RXN] == * direction: ** reversible * common-name: ** n-acetyl...")
(Created page with "Category:reaction == Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** naringenin-chalcone synthase * ec-number: ** [http://enzy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-ACETYLTRANSFER-RXN N-ACETYLTRANSFER-RXN] ==
+
== Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** n-acetylglutamate synthase
+
** naringenin-chalcone synthase
** acetyl-coa:l-glutamate n-acetyltransferase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.3.1.1 ec-2.3.1.1]
+
** [http://enzyme.expasy.org/EC/2.3.1.74 ec-2.3.1.74]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ACETYL-COA]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[ACETYL-GLU]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c]
+
* 3 [[MALONYL-COA]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-20012]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ18007]]
+
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ05827]]
+
* Gene: [[SJ20077]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
+
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
+
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[GLUTORN-PWY]], L-ornithine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTORN-PWY GLUTORN-PWY]
 
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5135]], xanthohumol biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7397]], naringenin biosynthesis (engineered):
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6316]], aromatic polyketides biosynthesis:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7897]], flavonoid di-C-glucosylation:
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR107087
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24295 24295]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11129 11129]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00259 R00259]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/Q9JW21 Q9JW21]
+
** [http://www.uniprot.org/uniprot/Q43188 Q43188]
** [http://www.uniprot.org/uniprot/P63574 P63574]
+
** [http://www.uniprot.org/uniprot/O04934 O04934]
** [http://www.uniprot.org/uniprot/Q12643 Q12643]
+
** [http://www.uniprot.org/uniprot/P17957 P17957]
** [http://www.uniprot.org/uniprot/P0A6C5 P0A6C5]
+
** [http://www.uniprot.org/uniprot/P30081 P30081]
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P30080 P30080]
{{#set: common-name=acetyl-coa:l-glutamate n-acetyltransferase|n-acetylglutamate synthase}}
+
** [http://www.uniprot.org/uniprot/Q9S9C0 Q9S9C0]
{{#set: ec-number=ec-2.3.1.1}}
+
** [http://www.uniprot.org/uniprot/Q9S9B9 Q9S9B9]
 +
** [http://www.uniprot.org/uniprot/P23419 P23419]
 +
** [http://www.uniprot.org/uniprot/P26018 P26018]
 +
** [http://www.uniprot.org/uniprot/P22928 P22928]
 +
** [http://www.uniprot.org/uniprot/P30079 P30079]
 +
** [http://www.uniprot.org/uniprot/Q01287 Q01287]
 +
** [http://www.uniprot.org/uniprot/Q01288 Q01288]
 +
** [http://www.uniprot.org/uniprot/P51078 P51078]
 +
** [http://www.uniprot.org/uniprot/P51080 P51080]
 +
** [http://www.uniprot.org/uniprot/P30078 P30078]
 +
** [http://www.uniprot.org/uniprot/Q01286 Q01286]
 +
** [http://www.uniprot.org/uniprot/P30073 P30073]
 +
** [http://www.uniprot.org/uniprot/P30074 P30074]
 +
** [http://www.uniprot.org/uniprot/P30076 P30076]
 +
** [http://www.uniprot.org/uniprot/P30077 P30077]
 +
** [http://www.uniprot.org/uniprot/P51089 P51089]
 +
** [http://www.uniprot.org/uniprot/P51075 P51075]
 +
** [http://www.uniprot.org/uniprot/P16107 P16107]
 +
** [http://www.uniprot.org/uniprot/P51077 P51077]
 +
** [http://www.uniprot.org/uniprot/P51079 P51079]
 +
** [http://www.uniprot.org/uniprot/P30075 P30075]
 +
** [http://www.uniprot.org/uniprot/P51081 P51081]
 +
** [http://www.uniprot.org/uniprot/P51082 P51082]
 +
** [http://www.uniprot.org/uniprot/P48390 P48390]
 +
** [http://www.uniprot.org/uniprot/P48405 P48405]
 +
** [http://www.uniprot.org/uniprot/P48406 P48406]
 +
** [http://www.uniprot.org/uniprot/P23569 P23569]
 +
** [http://www.uniprot.org/uniprot/P13416 P13416]
 +
** [http://www.uniprot.org/uniprot/P13417 P13417]
 +
** [http://www.uniprot.org/uniprot/P17818 P17818]
 +
** [http://www.uniprot.org/uniprot/P13114 P13114]
 +
** [http://www.uniprot.org/uniprot/P08894 P08894]
 +
** [http://www.uniprot.org/uniprot/P22924 P22924]
 +
** [http://www.uniprot.org/uniprot/P22925 P22925]
 +
** [http://www.uniprot.org/uniprot/P22926 P22926]
 +
** [http://www.uniprot.org/uniprot/P22927 P22927]
 +
** [http://www.uniprot.org/uniprot/P06515 P06515]
 +
** [http://www.uniprot.org/uniprot/P24826 P24826]
 +
** [http://www.uniprot.org/uniprot/P19168 P19168]
 +
** [http://www.uniprot.org/uniprot/P24825 P24825]
 +
** [http://www.uniprot.org/uniprot/P24824 P24824]
 +
** [http://www.uniprot.org/uniprot/Q40005 Q40005]
 +
** [http://www.uniprot.org/uniprot/Q96562 Q96562]
 +
** [http://www.uniprot.org/uniprot/O22047 O22047]
 +
** [http://www.uniprot.org/uniprot/O04971 O04971]
 +
** [http://www.uniprot.org/uniprot/P48389 P48389]
 +
** [http://www.uniprot.org/uniprot/P48398 P48398]
 +
** [http://www.uniprot.org/uniprot/P48399 P48399]
 +
** [http://www.uniprot.org/uniprot/Q96568 Q96568]
 +
** [http://www.uniprot.org/uniprot/P48397 P48397]
 +
** [http://www.uniprot.org/uniprot/O04966 O04966]
 +
** [http://www.uniprot.org/uniprot/O04967 O04967]
 +
** [http://www.uniprot.org/uniprot/O04968 O04968]
 +
** [http://www.uniprot.org/uniprot/O04969 O04969]
 +
** [http://www.uniprot.org/uniprot/O04970 O04970]
 +
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
 +
</div>
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=naringenin-chalcone synthase}}
 +
{{#set: ec-number=ec-2.3.1.74}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • naringenin-chalcone synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6787, flavonoid biosynthesis (in equisetum):
    • 6 reactions found over 10 reactions in the full pathway
  • PWY1F-FLAVSYN, flavonoid biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5135, xanthohumol biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7397, naringenin biosynthesis (engineered):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6316, aromatic polyketides biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7897, flavonoid di-C-glucosylation:
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links