Difference between revisions of "NARINGENIN-CHALCONE-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction ANTHRANSYN-RXN == * direction: ** reversible * common-name: ** anthranilate synthase * ec-number: ** [http://enzyme.expasy.org/EC/4.1.3.27 ec...")
(Created page with "Category:reaction == Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN == * direction: ** left-to-right * common-name: ** naringenin-chalcone synthase * ec-number: ** [http://enzy...")
 
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ANTHRANSYN-RXN ==
+
== Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN ==
 
* direction:
 
* direction:
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
** anthranilate synthase
+
** naringenin-chalcone synthase
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.3.27 ec-4.1.3.27]
+
** [http://enzyme.expasy.org/EC/2.3.1.74 ec-2.3.1.74]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[CHORISMATE]][c] '''+''' 1 [[GLN]][c] '''<=>''' 1 [[ANTHRANILATE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 3 [[MALONYL-COA]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[PROTON]][c] '''=>''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c] '''+''' 1 [[CPD-20012]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ17628]]
+
* Gene: [[SJ18059]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
* Gene: [[SJ01083]]
+
* Gene: [[SJ20077]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-5958]], acridone alkaloid biosynthesis:
+
* [[PWY-6787]], flavonoid biosynthesis (in equisetum):
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''10''' reactions in the full pathway
* [[TRPSYN-PWY]], L-tryptophan biosynthesis:
+
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis:
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6661]], 4-hydroxy-2(1H)-quinolone biosynthesis:
+
* [[PWY-5135]], xanthohumol biosynthesis:
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-6660]], 2-heptyl-3-hydroxy-4(1H)-quinolone biosynthesis:
+
* [[PWY-7397]], naringenin biosynthesis (engineered):
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6316]], aromatic polyketides biosynthesis:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7897]], flavonoid di-C-glucosylation:
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* METANETX-RXN : MNXR107087
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21735 21735]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11129 11129]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00986 R00986]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P00897 P00897]
+
** [http://www.uniprot.org/uniprot/Q43188 Q43188]
** [http://www.uniprot.org/uniprot/P15395 P15395]
+
** [http://www.uniprot.org/uniprot/O04934 O04934]
** [http://www.uniprot.org/uniprot/P21690 P21690]
+
** [http://www.uniprot.org/uniprot/P17957 P17957]
** [http://www.uniprot.org/uniprot/P33975 P33975]
+
** [http://www.uniprot.org/uniprot/P30081 P30081]
** [http://www.uniprot.org/uniprot/Q9PIF4 Q9PIF4]
+
** [http://www.uniprot.org/uniprot/P30080 P30080]
** [http://www.uniprot.org/uniprot/P06557 P06557]
+
** [http://www.uniprot.org/uniprot/Q9S9C0 Q9S9C0]
** [http://www.uniprot.org/uniprot/P20463 P20463]
+
** [http://www.uniprot.org/uniprot/Q9S9B9 Q9S9B9]
** [http://www.uniprot.org/uniprot/P09786 P09786]
+
** [http://www.uniprot.org/uniprot/P23419 P23419]
** [http://www.uniprot.org/uniprot/Q06129 Q06129]
+
** [http://www.uniprot.org/uniprot/P26018 P26018]
** [http://www.uniprot.org/uniprot/P33974 P33974]
+
** [http://www.uniprot.org/uniprot/P22928 P22928]
** [http://www.uniprot.org/uniprot/Q9R5Z6 Q9R5Z6]
+
** [http://www.uniprot.org/uniprot/P30079 P30079]
** [http://www.uniprot.org/uniprot/Q58475 Q58475]
+
** [http://www.uniprot.org/uniprot/Q01287 Q01287]
** [http://www.uniprot.org/uniprot/P20441 P20441]
+
** [http://www.uniprot.org/uniprot/Q01288 Q01288]
** [http://www.uniprot.org/uniprot/P43761 P43761]
+
** [http://www.uniprot.org/uniprot/P51078 P51078]
** [http://www.uniprot.org/uniprot/Q57686 Q57686]
+
** [http://www.uniprot.org/uniprot/P51080 P51080]
** [http://www.uniprot.org/uniprot/Q08654 Q08654]
+
** [http://www.uniprot.org/uniprot/P30078 P30078]
** [http://www.uniprot.org/uniprot/Q8X3T2 Q8X3T2]
+
** [http://www.uniprot.org/uniprot/Q01286 Q01286]
** [http://www.uniprot.org/uniprot/P20580 P20580]
+
** [http://www.uniprot.org/uniprot/P30073 P30073]
** [http://www.uniprot.org/uniprot/Q08653 Q08653]
+
** [http://www.uniprot.org/uniprot/P30074 P30074]
** [http://www.uniprot.org/uniprot/Q8X3T1 Q8X3T1]
+
** [http://www.uniprot.org/uniprot/P30076 P30076]
** [http://www.uniprot.org/uniprot/P20579 P20579]
+
** [http://www.uniprot.org/uniprot/P30077 P30077]
** [http://www.uniprot.org/uniprot/P09785 P09785]
+
** [http://www.uniprot.org/uniprot/P51089 P51089]
** [http://www.uniprot.org/uniprot/Q9JUS0 Q9JUS0]
+
** [http://www.uniprot.org/uniprot/P51075 P51075]
** [http://www.uniprot.org/uniprot/Q02001 Q02001]
+
** [http://www.uniprot.org/uniprot/P16107 P16107]
** [http://www.uniprot.org/uniprot/Q57690 Q57690]
+
** [http://www.uniprot.org/uniprot/P51077 P51077]
** [http://www.uniprot.org/uniprot/Q9XAZ0 Q9XAZ0]
+
** [http://www.uniprot.org/uniprot/P51079 P51079]
** [http://www.uniprot.org/uniprot/Q9PIF5 Q9PIF5]
+
** [http://www.uniprot.org/uniprot/P30075 P30075]
** [http://www.uniprot.org/uniprot/P42387 P42387]
+
** [http://www.uniprot.org/uniprot/P51081 P51081]
** [http://www.uniprot.org/uniprot/P42388 P42388]
+
** [http://www.uniprot.org/uniprot/P51082 P51082]
** [http://www.uniprot.org/uniprot/Q06128 Q06128]
+
** [http://www.uniprot.org/uniprot/P48390 P48390]
** [http://www.uniprot.org/uniprot/P18267 P18267]
+
** [http://www.uniprot.org/uniprot/P48405 P48405]
** [http://www.uniprot.org/uniprot/P32068 P32068]
+
** [http://www.uniprot.org/uniprot/P48406 P48406]
** [http://www.uniprot.org/uniprot/Q42565 Q42565]
+
** [http://www.uniprot.org/uniprot/P23569 P23569]
** [http://www.uniprot.org/uniprot/P20409 P20409]
+
** [http://www.uniprot.org/uniprot/P13416 P13416]
** [http://www.uniprot.org/uniprot/P14953 P14953]
+
** [http://www.uniprot.org/uniprot/P13417 P13417]
** [http://www.uniprot.org/uniprot/P03963 P03963]
+
** [http://www.uniprot.org/uniprot/P17818 P17818]
** [http://www.uniprot.org/uniprot/P00899 P00899]
+
** [http://www.uniprot.org/uniprot/P13114 P13114]
** [http://www.uniprot.org/uniprot/P00937 P00937]
+
** [http://www.uniprot.org/uniprot/P08894 P08894]
** [http://www.uniprot.org/uniprot/P00896 P00896]
+
** [http://www.uniprot.org/uniprot/P22924 P22924]
** [http://www.uniprot.org/uniprot/P00898 P00898]
+
** [http://www.uniprot.org/uniprot/P22925 P22925]
** [http://www.uniprot.org/uniprot/P00906 P00906]
+
** [http://www.uniprot.org/uniprot/P22926 P22926]
** [http://www.uniprot.org/uniprot/P00905 P00905]
+
** [http://www.uniprot.org/uniprot/P22927 P22927]
** [http://www.uniprot.org/uniprot/P00895 P00895]
+
** [http://www.uniprot.org/uniprot/P06515 P06515]
** [http://www.uniprot.org/uniprot/P00904 P00904]
+
** [http://www.uniprot.org/uniprot/P24826 P24826]
** [http://www.uniprot.org/uniprot/P00902 P00902]
+
** [http://www.uniprot.org/uniprot/P19168 P19168]
** [http://www.uniprot.org/uniprot/P00908 P00908]
+
** [http://www.uniprot.org/uniprot/P24825 P24825]
** [http://www.uniprot.org/uniprot/P00901 P00901]
+
** [http://www.uniprot.org/uniprot/P24824 P24824]
** [http://www.uniprot.org/uniprot/P00900 P00900]
+
** [http://www.uniprot.org/uniprot/Q40005 Q40005]
** [http://www.uniprot.org/uniprot/P14952 P14952]
+
** [http://www.uniprot.org/uniprot/Q96562 Q96562]
** [http://www.uniprot.org/uniprot/P05328 P05328]
+
** [http://www.uniprot.org/uniprot/O22047 O22047]
** [http://www.uniprot.org/uniprot/P06531 P06531]
+
** [http://www.uniprot.org/uniprot/O04971 O04971]
** [http://www.uniprot.org/uniprot/P23315 P23315]
+
** [http://www.uniprot.org/uniprot/P48389 P48389]
** [http://www.uniprot.org/uniprot/P25170 P25170]
+
** [http://www.uniprot.org/uniprot/P48398 P48398]
** [http://www.uniprot.org/uniprot/P30526 P30526]
+
** [http://www.uniprot.org/uniprot/P48399 P48399]
** [http://www.uniprot.org/uniprot/P32069 P32069]
+
** [http://www.uniprot.org/uniprot/Q96568 Q96568]
** [http://www.uniprot.org/uniprot/P24773 P24773]
+
** [http://www.uniprot.org/uniprot/P48397 P48397]
** [http://www.uniprot.org/uniprot/Q02003 Q02003]
+
** [http://www.uniprot.org/uniprot/O04966 O04966]
** [http://www.uniprot.org/uniprot/P51362 P51362]
+
** [http://www.uniprot.org/uniprot/O04967 O04967]
** [http://www.uniprot.org/uniprot/Q55144 Q55144]
+
** [http://www.uniprot.org/uniprot/O04968 O04968]
** [http://www.uniprot.org/uniprot/P20170 P20170]
+
** [http://www.uniprot.org/uniprot/O04969 O04969]
** [http://www.uniprot.org/uniprot/P74130 P74130]
+
** [http://www.uniprot.org/uniprot/O04970 O04970]
** [http://www.uniprot.org/uniprot/O81533 O81533]
+
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
** [http://www.uniprot.org/uniprot/Q08073 Q08073]
 
** [http://www.uniprot.org/uniprot/P48261 P48261]
 
** [http://www.uniprot.org/uniprot/Q92370 Q92370]
 
** [http://www.uniprot.org/uniprot/Q9S593 Q9S593]
 
** [http://www.uniprot.org/uniprot/Q9X7C5 Q9X7C5]
 
** [http://www.uniprot.org/uniprot/Q9RQG2 Q9RQG2]
 
** [http://www.uniprot.org/uniprot/Q9ZFA9 Q9ZFA9]
 
** [http://www.uniprot.org/uniprot/Q41156 Q41156]
 
 
</div>
 
</div>
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
{{#set: common-name=anthranilate synthase}}
+
{{#set: common-name=naringenin-chalcone synthase}}
{{#set: ec-number=ec-4.1.3.27}}
+
{{#set: ec-number=ec-2.3.1.74}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=6}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology|annotation}}
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus|output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana}}
+
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:19, 18 March 2021

Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • naringenin-chalcone synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6787, flavonoid biosynthesis (in equisetum):
    • 6 reactions found over 10 reactions in the full pathway
  • PWY1F-FLAVSYN, flavonoid biosynthesis:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5135, xanthohumol biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7397, naringenin biosynthesis (engineered):
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6316, aromatic polyketides biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7897, flavonoid di-C-glucosylation:
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links