Difference between revisions of "NARINGENIN-CMPD"

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(Created page with "Category:reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] == * direction: ** left-to-right * common-name: ** 4-diphosphocytidyl-2c...")
(Created page with "Category:metabolite == Metabolite CPD-5881 == * common-name: ** (6r)-4a-hydroxy-tetrahydrobiopterin * smiles: ** cc(o)c(o)[ch]1(cnc2(=nc(n)=nc(=o)c(o)(n1)2)) * inchi-key:...")
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[[Category:reaction]]
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[[Category:metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.60-RXN 2.7.7.60-RXN] ==
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== Metabolite CPD-5881 ==
* direction:
 
** left-to-right
 
 
* common-name:
 
* common-name:
** 4-diphosphocytidyl-2c-methyl-d-erythritol synthase
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** (6r)-4a-hydroxy-tetrahydrobiopterin
* ec-number:
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* smiles:
** [http://enzyme.expasy.org/EC/2.7.7.60 ec-2.7.7.60]
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** cc(o)c(o)[ch]1(cnc2(=nc(n)=nc(=o)c(o)(n1)2))
* synonymous:
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* inchi-key:
** 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)
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** kjkiefupappgbc-xxkocqoqsa-n
== Reaction formula ==
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* molecular-weight:
* 1 [[2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE]][c] '''+''' 1 [[CTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[PPI]][c]
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** 257.249
== Gene(s) associated with this reaction  ==
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== Reaction(s) known to consume the compound ==
* Gene: [[SJ10622]]
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* [[RXN-7908]]
** Category: [[annotation]]
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== Reaction(s) known to produce the compound ==
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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== Reaction(s) of unknown directionality ==
** Category: [[orthology]]
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{{#set: common-name=(6r)-4a-hydroxy-tetrahydrobiopterin}}
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: inchi-key=inchikey=kjkiefupappgbc-xxkocqoqsa-n}}
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: molecular-weight=257.249}}
== Pathway(s) ==
 
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13429 13429]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R05633 R05633]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=4-diphosphocytidyl-2c-methyl-d-erythritol synthase}}
 
{{#set: ec-number=ec-2.7.7.60}}
 
{{#set: synonymous=4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome|output_pantograph_nannochloropsis_salina}}
 

Revision as of 20:35, 18 December 2020

Metabolite CPD-5881

  • common-name:
    • (6r)-4a-hydroxy-tetrahydrobiopterin
  • smiles:
    • cc(o)c(o)[ch]1(cnc2(=nc(n)=nc(=o)c(o)(n1)2))
  • inchi-key:
    • kjkiefupappgbc-xxkocqoqsa-n
  • molecular-weight:
    • 257.249

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality