Difference between revisions of "NDPK"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN-17116 == * direction: ** left-to-right * common-name: ** acetyl-coa c-acyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1....")
(Created page with "Category:reaction == Reaction GLUTCYSLIG-RXN == * direction: ** left-to-right * common-name: ** glutamate-cysteine ligase * ec-number: ** [http://enzyme.expasy.org/EC/6.3....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17116 ==
+
== Reaction GLUTCYSLIG-RXN ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** acetyl-coa c-acyltransferase
+
** glutamate-cysteine ligase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.16 ec-2.3.1.16]
+
** [http://enzyme.expasy.org/EC/6.3.2.2 ec-6.3.2.2]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CO-A]][c] '''+''' 1 [[CPD-18494]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-17365]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[GLT]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[L-GAMMA-GLUTAMYLCYSTEINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ21817]]
+
* Gene: [[SJ12601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ09371]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14898]]
+
* Gene: [[SJ19108]]
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
−
* Gene: [[SJ16470]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[SJ21818]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7726]], (4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase):
+
* [[PWY-7255]], ergothioneine biosynthesis I (bacteria):
−
** '''8''' reactions found over '''13''' reactions in the full pathway
+
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[GLUTATHIONESYN-PWY]], glutathione biosynthesis:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6840]], homoglutathione biosynthesis:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13286 13286]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00894 R00894]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P19468 P19468]
 +
** [http://www.uniprot.org/uniprot/Q56277 Q56277]
 +
** [http://www.uniprot.org/uniprot/Q9JZI4 Q9JZI4]
 +
** [http://www.uniprot.org/uniprot/Q9JU83 Q9JU83]
 +
** [http://www.uniprot.org/uniprot/P48507 P48507]
 +
** [http://www.uniprot.org/uniprot/P48506 P48506]
 +
** [http://www.uniprot.org/uniprot/P32477 P32477]
 +
** [http://www.uniprot.org/uniprot/P0A6W9 P0A6W9]
 +
** [http://www.uniprot.org/uniprot/O22493 O22493]
 +
** [http://www.uniprot.org/uniprot/P46309 P46309]
 +
** [http://www.uniprot.org/uniprot/Q9TY17 Q9TY17]
 +
** [http://www.uniprot.org/uniprot/Q09768 Q09768]
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=acetyl-coa c-acyltransferase}}
+
{{#set: common-name=glutamate-cysteine ligase}}
−
{{#set: ec-number=ec-2.3.1.16}}
+
{{#set: ec-number=ec-6.3.2.2}}
−
{{#set: nb gene associated=5}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 11:25, 15 January 2021

Reaction GLUTCYSLIG-RXN

  • direction:
    • left-to-right
  • common-name:
    • glutamate-cysteine ligase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7255, ergothioneine biosynthesis I (bacteria):
    • 2 reactions found over 7 reactions in the full pathway
  • GLUTATHIONESYN-PWY, glutathione biosynthesis:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6840, homoglutathione biosynthesis:
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=NDPK&oldid=116316"