Difference between revisions of "NUCLEOSIDE-DIP-KIN-RXN"

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(Created page with "Category:reaction == Reaction RXN-14216 == * direction: ** left-to-right == Reaction formula == * 1 DCTP[c] '''+''' 1 WATER[c] '''=>''' 1 DCDP[c] '''+''' 1 P...")
(Created page with "Category:reaction == Reaction RXN0-5055 == * direction: ** left-to-right * common-name: ** acetyl-coa carboxyltransferase * ec-number: ** [http://enzyme.expasy.org/EC/2.1....")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14216 ==
+
== Reaction RXN0-5055 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** acetyl-coa carboxyltransferase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.1.3.d ec-2.1.3.d]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DCTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[DCDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[carboxybiotin-L-lysine-in-BCCP-dimers]][c] '''=>''' 1 [[MALONYL-COA]][c] '''+''' 1 [[biotin-L-lysine-in-BCCP-dimers]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ16444]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ14528]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ17987]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ14529]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06726]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ00484]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5744]], glyoxylate assimilation:
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5743]], 3-hydroxypropanoate cycle:
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]], 3-hydroxypropanoate/4-hydroxybutanate cycle:
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY0-1264]], biotin-carboxyl carrier protein assembly:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6722]], candicidin biosynthesis:
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-4381]], fatty acid biosynthesis initiation (bacteria and plants):
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=acetyl-coa carboxyltransferase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: ec-number=ec-2.1.3.d}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb gene associated=5}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: nb pathway associated=6}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:04, 5 January 2021

Reaction RXN0-5055

  • direction:
    • left-to-right
  • common-name:
    • acetyl-coa carboxyltransferase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5744, glyoxylate assimilation:
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743, 3-hydroxypropanoate cycle:
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789, 3-hydroxypropanoate/4-hydroxybutanate cycle:
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264, biotin-carboxyl carrier protein assembly:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6722, candicidin biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-4381, fatty acid biosynthesis initiation (bacteria and plants):
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=NUCLEOSIDE-DIP-KIN-RXN&oldid=63492"