Difference between revisions of "ORPRT"
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(Created page with "Category:reaction == Reaction RXN-12878 == * direction: ** left-to-right * common-name: ** glutamate dehydrogenase (ferredoxin) == Reaction formula == * 1 GLT[c] '''+'...") |
(Created page with "Category:reaction == Reaction RXN1G-2544 == * direction: ** left-to-right * common-name: ** cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase ** cis-met...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction RXN1G-2544 == |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
* common-name: | * common-name: | ||
| − | ** | + | ** cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase |
| + | ** cis-methoxy-c59-meroacyl-[acp] synthase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.1.1.79 ec-2.1.1.79] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[cis-D19-37-MOH-38-Me-C57-1-ACPs]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[cis-19-CP-37-Mex-38-Me-C59-ACPs]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ13641]] |
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** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| + | * [[PWYG-321]], mycolate biosynthesis: | ||
| + | ** '''26''' reactions found over '''182''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== External links == | == External links == | ||
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{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
| − | {{#set: common-name= | + | {{#set: common-name=cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase|cis-methoxy-c59-meroacyl-[acp] synthase}} |
| − | {{#set: nb gene associated= | + | {{#set: ec-number=ec-2.1.1.79}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb gene associated=1}} |
| + | {{#set: nb pathway associated=1}} | ||
{{#set: reconstruction category=annotation|orthology}} | {{#set: reconstruction category=annotation|orthology}} | ||
| − | {{#set: reconstruction tool=pantograph | + | {{#set: reconstruction tool=pathwaytools|pantograph}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} | ||
Revision as of 15:06, 5 January 2021
Contents
Reaction RXN1G-2544
- direction:
- left-to-right
- common-name:
- cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase
- cis-methoxy-c59-meroacyl-[acp] synthase
- ec-number:
Reaction formula
- 1 S-ADENOSYLMETHIONINE[c] + 1 cis-D19-37-MOH-38-Me-C57-1-ACPs[c] => 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c] + 1 cis-19-CP-37-Mex-38-Me-C59-ACPs[c]
Gene(s) associated with this reaction
- Gene: SJ13641
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWYG-321, mycolate biosynthesis:
- 26 reactions found over 182 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
External links
- Property "Common-name" (as page type) with input value "cis-cyclopropane-δ19-37-hydroxy-38-methyl-c57:1-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
- Property "Common-name" (as page type) with input value "cis-methoxy-c59-meroacyl-[acp] synthase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
