Difference between revisions of "PGLYCDEHYDROG-RXN"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-3052 tax-3052...")
 
(Created page with "Category:reaction == Reaction PGLYCDEHYDROG-RXN == * direction: ** reversible * common-name: ** d-3-phosphoglycerate dehydrogenase * ec-number: ** [http://enzyme.expasy.or...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
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== Reaction PGLYCDEHYDROG-RXN ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-3052 tax-3052]
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** reversible
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-1224 tax-1224]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-68336 tax-68336]
 
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-200783 tax-200783]
 
 
* common-name:
 
* common-name:
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** reductive tca cycle i
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** d-3-phosphoglycerate dehydrogenase
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== Reaction(s) found ==
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* ec-number:
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* [[ACONITATEDEHYDR-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.95 ec-1.1.1.95]
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* [[ACONITATEHYDR-RXN]]
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== Reaction formula ==
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* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
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* 1 [[G3P]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[3-P-HYDROXYPYRUVATE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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* [[FUMHYDR-RXN]]
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== Gene(s) associated with this reaction  ==
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* [[ISOCITDEH-RXN]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[MALATE-DEH-RXN]]
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* Gene: [[SJ02143]]
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* [[PEPCARBOX-RXN]]
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** Category: [[annotation]]
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* [[PYRUFLAVREDUCT-RXN]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* [[SUCCCOASYN-RXN]]
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** Category: [[orthology]]
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== Reaction(s) not found ==
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=PEPSYNTH-RXN PEPSYNTH-RXN]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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* Gene: [[SJ13642]]
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{{#set: taxonomic-range=tax-2157|tax-200783|tax-68336|tax-1224|tax-3052}}
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** Category: [[annotation]]
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{{#set: common-name=reductive tca cycle i}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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{{#set: nb reaction found=9}}
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** Category: [[orthology]]
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{{#set: completion rate=0.75}}
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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{{#set: nb total reaction=12}}
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* Gene: [[SJ13526]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ09109]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[SERSYN-PWY]], L-serine biosynthesis I:
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR102527
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* RHEA:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12644 12644]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R01513 R01513]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q58424 Q58424]
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** [http://www.uniprot.org/uniprot/P43885 P43885]
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** [http://www.uniprot.org/uniprot/P35136 P35136]
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** [http://www.uniprot.org/uniprot/Q9PP40 Q9PP40]
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** [http://www.uniprot.org/uniprot/P0A9T0 P0A9T0]
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** [http://www.uniprot.org/uniprot/P40510 P40510]
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** [http://www.uniprot.org/uniprot/P40054 P40054]
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** [http://www.uniprot.org/uniprot/O49485 O49485]
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** [http://www.uniprot.org/uniprot/P87228 P87228]
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** [http://www.uniprot.org/uniprot/O04130 O04130]
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{{#set: direction=reversible}}
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{{#set: common-name=d-3-phosphoglycerate dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.95}}
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{{#set: nb gene associated=4}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_ectocarpus_siliculosus|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome}}

Latest revision as of 11:23, 18 March 2021

Reaction PGLYCDEHYDROG-RXN

  • direction:
    • reversible
  • common-name:
    • d-3-phosphoglycerate dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • SERSYN-PWY, L-serine biosynthesis I:
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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