Difference between revisions of "PGMTh"
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(Created page with "Category:reaction == Reaction N-ACETYLTRANSFER-RXN == * direction: ** reversible * common-name: ** n-acetylglutamate synthase ** acetyl-coa:l-glutamate n-acetyltransferase...") |
(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROG-RXN == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nad) ** alcohol dehydrogenase * ec-number: ** [ht...") |
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Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction ALCOHOL-DEHYDROG-RXN == |
* direction: | * direction: | ||
** reversible | ** reversible | ||
* common-name: | * common-name: | ||
− | ** | + | ** alcohol dehydrogenase (nad) |
− | ** | + | ** alcohol dehydrogenase |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1] |
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[ETOH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
− | * Gene: [[ | + | * Gene: [[SJ07759]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
− | + | * Gene: [[SJ21601]] | |
− | |||
− | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
− | ** Category: [[ | + | * Gene: [[SJ14768]] |
− | *** Source: [[ | + | ** Category: [[annotation]] |
+ | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[PWY-6587]], pyruvate fermentation to ethanol III: |
− | * [[ | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
− | ** ''' | + | * [[PWY-5480]], pyruvate fermentation to ethanol I: |
− | * [[ | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | ** '''5''' reactions found over ''' | + | * [[P161-PWY]], acetylene degradation (anaerobic): |
+ | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]], mixed acid fermentation: | ||
+ | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[PWY-6333]], acetaldehyde biosynthesis I: | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-5486]], pyruvate fermentation to ethanol II: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P122-PWY]], heterolactic fermentation: | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY66-21]], ethanol degradation II: | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I: | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii): | ||
+ | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7118]], chitin degradation to ethanol: | ||
+ | ** '''5''' reactions found over '''6''' reactions in the full pathway | ||
+ | </div> | ||
== Reconstruction information == | == Reconstruction information == | ||
− | |||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25293 25293] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754] |
− | |||
− | |||
− | |||
− | |||
− | |||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
− | {{#set: common-name= | + | {{#set: common-name=alcohol dehydrogenase|alcohol dehydrogenase (nad)}} |
− | {{#set: ec-number=ec- | + | {{#set: ec-number=ec-1.1.1.1}} |
− | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=11}} |
− | {{#set: reconstruction category=annotation | + | {{#set: reconstruction category=annotation}} |
− | {{#set: reconstruction tool=pathwaytools | + | {{#set: reconstruction tool=pathwaytools}} |
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
− | {{#set: reconstruction source=saccharina_japonica_genome | + | {{#set: reconstruction source=saccharina_japonica_genome}} |
Revision as of 19:06, 14 January 2021
Contents
Reaction ALCOHOL-DEHYDROG-RXN
- direction:
- reversible
- common-name:
- alcohol dehydrogenase (nad)
- alcohol dehydrogenase
- ec-number:
Reaction formula
Gene(s) associated with this reaction
- Gene: SJ07759
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
- Gene: SJ21601
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: SJ14768
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6587, pyruvate fermentation to ethanol III:
- 2 reactions found over 3 reactions in the full pathway
- PWY-5480, pyruvate fermentation to ethanol I:
- 1 reactions found over 3 reactions in the full pathway
- P161-PWY, acetylene degradation (anaerobic):
- 2 reactions found over 5 reactions in the full pathway
- FERMENTATION-PWY, mixed acid fermentation:
- 11 reactions found over 16 reactions in the full pathway
- PWY-6333, acetaldehyde biosynthesis I:
- 1 reactions found over 1 reactions in the full pathway
- PWY-5486, pyruvate fermentation to ethanol II:
- 1 reactions found over 2 reactions in the full pathway
- P122-PWY, heterolactic fermentation:
- 16 reactions found over 18 reactions in the full pathway
- PWY66-21, ethanol degradation II:
- 3 reactions found over 3 reactions in the full pathway
- ETOH-ACETYLCOA-ANA-PWY, ethanol degradation I:
- 1 reactions found over 2 reactions in the full pathway
- PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii):
- 7 reactions found over 7 reactions in the full pathway
- PWY-7118, chitin degradation to ethanol:
- 5 reactions found over 6 reactions in the full pathway
Reconstruction information
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links