Difference between revisions of "PGMTh"

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(Created page with "Category:reaction == Reaction ALCOHOL-DEHYDROG-RXN == * direction: ** reversible * common-name: ** alcohol dehydrogenase (nad) ** alcohol dehydrogenase * ec-number: ** [ht...")
(Created page with "Category:reaction == Reaction ACOA80OR == * direction: ** left-to-right * common-name: ** octanoyl-coa:oxygen 2-oxidoreductase == Reaction formula == * 1.0 CPD-196[x]...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALCOHOL-DEHYDROG-RXN ==
+
== Reaction ACOA80OR ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** alcohol dehydrogenase (nad)
+
** octanoyl-coa:oxygen 2-oxidoreductase
−
** alcohol dehydrogenase
 
−
* ec-number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.1 ec-1.1.1.1]
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ETOH]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[ACETALD]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
* 1.0 [[CPD-196]][x] '''+''' 1.0 [[FAD]][x] '''=>''' 1.0 [[CPD0-2108]][x] '''+''' 1.0 [[FADH2]][x]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07759]]
+
* Gene: [[SJ13468]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ21601]]
+
* Gene: [[SJ07909]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
−
* Gene: [[SJ14768]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-6587]], pyruvate fermentation to ethanol III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5480]], pyruvate fermentation to ethanol I:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P161-PWY]], acetylene degradation (anaerobic):
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FERMENTATION-PWY]], mixed acid fermentation:
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-6333]], acetaldehyde biosynthesis I:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-5486]], pyruvate fermentation to ethanol II:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation:
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY66-21]], ethanol degradation II:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[ETOH-ACETYLCOA-ANA-PWY]], ethanol degradation I:
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7118]], chitin degradation to ethanol:
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=left-to-right}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25293 25293]
+
{{#set: common-name=octanoyl-coa:oxygen 2-oxidoreductase}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00754 R00754]
+
{{#set: nb pathway associated=0}}
−
{{#set: direction=reversible}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: common-name=alcohol dehydrogenase|alcohol dehydrogenase (nad)}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: ec-number=ec-1.1.1.1}}
 
−
{{#set: nb gene associated=3}}
 
−
{{#set: nb pathway associated=11}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 11:26, 15 January 2021

Reaction ACOA80OR

  • direction:
    • left-to-right
  • common-name:
    • octanoyl-coa:oxygen 2-oxidoreductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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