Difference between revisions of "PGMTh"
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(Created page with "Category:reaction == Reaction RXN-17334 == * direction: ** left-to-right == Reaction formula == * 1 CPD-18762[c] '''=>''' 1 CPD-18733[c] == Gene(s) associated with...") |
(Created page with "Category:reaction == Reaction N-ACETYLTRANSFER-RXN == * direction: ** reversible * common-name: ** n-acetylglutamate synthase ** acetyl-coa:l-glutamate n-acetyltransferase...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction RXN | + | == Reaction N-ACETYLTRANSFER-RXN == |
* direction: | * direction: | ||
| − | ** | + | ** reversible |
| + | * common-name: | ||
| + | ** n-acetylglutamate synthase | ||
| + | ** acetyl-coa:l-glutamate n-acetyltransferase | ||
| + | * ec-number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.1 ec-2.3.1.1] | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[ACETYL-COA]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[ACETYL-GLU]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[PROTON]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| − | * Gene: [[ | + | * Gene: [[SJ18007]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| − | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: | + | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a |
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a |
| − | *** Source: [[ | + | * Gene: [[SJ05827]] |
| − | * Gene: [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | *** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY- | + | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): |
| − | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| + | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): | ||
| + | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[GLUTORN-PWY]], L-ornithine biosynthesis I: | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| + | * category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | * category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24295 24295] |
| − | {{#set: direction= | + | * LIGAND-RXN: |
| − | {{#set: nb gene associated= | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00259 R00259] |
| − | {{#set: nb pathway associated= | + | * UNIPROT: |
| − | {{#set: reconstruction category=annotation}} | + | ** [http://www.uniprot.org/uniprot/Q9JW21 Q9JW21] |
| − | {{#set: reconstruction tool=pathwaytools}} | + | ** [http://www.uniprot.org/uniprot/P63574 P63574] |
| + | ** [http://www.uniprot.org/uniprot/Q12643 Q12643] | ||
| + | ** [http://www.uniprot.org/uniprot/P0A6C5 P0A6C5] | ||
| + | {{#set: direction=reversible}} | ||
| + | {{#set: common-name=n-acetylglutamate synthase|acetyl-coa:l-glutamate n-acetyltransferase}} | ||
| + | {{#set: ec-number=ec-2.3.1.1}} | ||
| + | {{#set: nb gene associated=2}} | ||
| + | {{#set: nb pathway associated=3}} | ||
| + | {{#set: reconstruction category=annotation|orthology}} | ||
| + | {{#set: reconstruction tool=pathwaytools|pantograph}} | ||
{{#set: reconstruction comment=n.a}} | {{#set: reconstruction comment=n.a}} | ||
| − | {{#set: reconstruction source=saccharina_japonica_genome}} | + | {{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}} |
Revision as of 13:19, 14 January 2021
Contents
Reaction N-ACETYLTRANSFER-RXN
- direction:
- reversible
- common-name:
- n-acetylglutamate synthase
- acetyl-coa:l-glutamate n-acetyltransferase
- ec-number:
Reaction formula
- 1 ACETYL-COA[c] + 1 GLT[c] <=> 1 ACETYL-GLU[c] + 1 CO-A[c] + 1 PROTON[c]
Gene(s) associated with this reaction
- Gene: SJ18007
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: SJ05827
- Category: annotation
- Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
- 8 reactions found over 9 reactions in the full pathway
- ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
- 9 reactions found over 9 reactions in the full pathway
- GLUTORN-PWY, L-ornithine biosynthesis I:
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
External links
