R223-RXN

Reaction R223-RXN

• direction:
  • left-to-right
• common-name:
  • octanoyl-coa ligase
  • acyl-coa synthetase
  • long-chain fatty acid-coa ligase
• ec-number:
  • ec-6.2.1.3

Reaction formula

• 1 ATP[c] + 1 CO-A[c] + 1 CPD-195[c] => 1 AMP[c] + 1 CPD-196[c] + 1 PPI[c]

Gene(s) associated with this reaction

• Gene: SJ08690
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: SJ08692
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
• Gene: SJ05591
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: go-term, Comment: n.a
• Gene: SJ03650
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: SJ13972
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a
• Gene: SJ08691
  • Category: annotation
    • Source: saccharina_japonica_genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
  • Category: orthology
    • Source: output_pantograph_ectocarpus_siliculosus, Tool: pantograph, Assignment: n.a, Comment: n.a

Pathway(s)

• PWY-6920, 6-gingerol analog biosynthesis (engineered):
  • 5 reactions found over 6 reactions in the full pathway
• P221-PWY, octane oxidation:
  • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

• category: annotation; source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
• category: orthology; source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a

External links

• METANETX-RXN : MNXR99205