Difference between revisions of "RXN-10655"

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(Created page with "Category:reaction == Reaction METHYLACETOACETYLCOATHIOL-RXN == * direction: ** reversible * common-name: ** 3-oxoacyl coa thiolase * ec-number: ** [http://enzyme.expasy.or...")
(Created page with "Category:reaction == Reaction RXN66-28 == * direction: ** left-to-right * ec-number: ** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72] == Reaction formula == * 1 DES...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction METHYLACETOACETYLCOATHIOL-RXN ==
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== Reaction RXN66-28 ==
 
* direction:
 
* direction:
−
** reversible
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** left-to-right
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* common-name:
 
−
** 3-oxoacyl coa thiolase
 
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.3.1.9 ec-2.3.1.9]
+
** [http://enzyme.expasy.org/EC/1.3.1.72 ec-1.3.1.72]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-METHYL-ACETO-ACETYL-COA]][c] '''+''' 1 [[CO-A]][c] '''<=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[PROPIONYL-COA]][c]
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* 1 [[DESMOSTEROL-CPD]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CHOLESTEROL]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ09371]]
 
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ21818]]
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
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* Gene: [[SJ14898]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[ILEUDEG-PWY]], L-isoleucine degradation I:
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
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** '''5''' reactions found over '''6''' reactions in the full pathway
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** '''14''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5109]], fermentation to 2-methylbutanoate:
 
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** '''3''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30721 30721]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00927 R00927]
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** [http://www.genome.jp/dbget-bin/www_bget?R01457 R01457]
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{{#set: direction=reversible}}
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{{#set: direction=left-to-right}}
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{{#set: common-name=3-oxoacyl coa thiolase}}
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{{#set: ec-number=ec-1.3.1.72}}
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{{#set: ec-number=ec-2.3.1.9}}
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{{#set: nb gene associated=0}}
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{{#set: nb gene associated=3}}
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{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction comment=added for gapfilling}}
−
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
−
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
 

Revision as of 13:18, 14 January 2021

Reaction RXN66-28

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY66-4, cholesterol biosynthesis III (via desmosterol):
    • 14 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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