Difference between revisions of "RXN-10702"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-21...")
 
(Created page with "Category:reaction == Reaction RXN-10702 == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydrogenase ** opc6-3-hydroxyacyl-coa dehydrogenase * ec-num...")
 
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[[Category:pathway]]
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[[Category:reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] ==
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== Reaction RXN-10702 ==
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* taxonomic-range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2157 tax-2157]
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** left-to-right
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** [http://metacyc.org/META/NEW-IMAGE?object=tax-2 tax-2]
 
 
* common-name:
 
* common-name:
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** 5-aminoimidazole ribonucleotide biosynthesis ii
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** 3-hydroxyacyl-coa dehydrogenase
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== Reaction(s) found ==
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** opc6-3-hydroxyacyl-coa dehydrogenase
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* [[AIRS-RXN]]
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* ec-number:
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* [[FGAMSYN-RXN]]
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** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
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* [[GLYRIBONUCSYN-RXN]]
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== Reaction formula ==
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* [[PRPPAMIDOTRANS-RXN]]
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* 1 [[CPD-11523]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-11524]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
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== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GARTRANSFORMYL2-RXN GARTRANSFORMYL2-RXN]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: taxonomic-range=tax-2|tax-2157}}
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* Gene: [[SJ21390]]
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{{#set: common-name=5-aminoimidazole ribonucleotide biosynthesis ii}}
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** Category: [[annotation]]
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{{#set: nb reaction found=4}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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{{#set: completion rate=0.8}}
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* Gene: [[SJ03584]]
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{{#set: nb total reaction=5}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ17348]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ01444]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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* Gene: [[SJ07211]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ06127]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ16470]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ16180]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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</div>
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== Pathway(s) ==
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* [[PWY-735]], jasmonic acid biosynthesis:
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** '''16''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== External links  ==
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* METANETX-RXN : MNXR116476
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{{#set: direction=left-to-right}}
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{{#set: common-name=opc6-3-hydroxyacyl-coa dehydrogenase|3-hydroxyacyl-coa dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.35}}
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{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=output_pantograph_ectocarpus_siliculosus|saccharina_japonica_genome}}

Latest revision as of 11:21, 18 March 2021

Reaction RXN-10702

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
    • opc6-3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-735, jasmonic acid biosynthesis:
    • 16 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

  • METANETX-RXN : MNXR116476





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