Difference between revisions of "RXN-10908"

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(Created page with "Category:reaction == Reaction HISTAMINOTRANS-RXN == * direction: ** reversible * common-name: ** l-phenylalanine:2-oxoglutarate aminotransferase ** histidinol-phosphate am...")
(Created page with "Category:reaction == Reaction RXN-17781 == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction HISTAMINOTRANS-RXN ==
+
== Reaction RXN-17781 ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** l-phenylalanine:2-oxoglutarate aminotransferase
+
** 3-hydroxyacyl-coa dehydrogenase
−
** histidinol-phosphate aminotransferase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.9 ec-2.6.1.9]
+
** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-HISTIDINOL-P]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[IMIDAZOLE-ACETOL-P]][c]
+
* 1 [[CPD-19168]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-19167]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07646]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ16180]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ05778]]
+
* Gene: [[SJ16470]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ04188]]
+
* Gene: [[SJ01444]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ03584]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ20943]]
+
* Gene: [[SJ07211]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ06127]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ21390]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17348]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[HISTSYN-PWY]], L-histidine biosynthesis:
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: direction=left-to-right}}
−
* RHEA:
+
{{#set: common-name=3-hydroxyacyl-coa dehydrogenase}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23747 23747]
+
{{#set: ec-number=ec-1.1.1.35}}
−
* LIGAND-RXN:
+
{{#set: nb gene associated=8}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R03243 R03243]
+
{{#set: nb pathway associated=0}}
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P17731 P17731]
 
−
** [http://www.uniprot.org/uniprot/P17736 P17736]
 
−
** [http://www.uniprot.org/uniprot/P56099 P56099]
 
−
** [http://www.uniprot.org/uniprot/Q9PII2 Q9PII2]
 
−
** [http://www.uniprot.org/uniprot/Q02135 Q02135]
 
−
** [http://www.uniprot.org/uniprot/Q58365 Q58365]
 
−
** [http://www.uniprot.org/uniprot/Q9JTH8 Q9JTH8]
 
−
** [http://www.uniprot.org/uniprot/P44423 P44423]
 
−
** [http://www.uniprot.org/uniprot/P16246 P16246]
 
−
** [http://www.uniprot.org/uniprot/P28735 P28735]
 
−
** [http://www.uniprot.org/uniprot/P36605 P36605]
 
−
** [http://www.uniprot.org/uniprot/P07172 P07172]
 
−
** [http://www.uniprot.org/uniprot/O82030 O82030]
 
−
** [http://www.uniprot.org/uniprot/Q9X7B8 Q9X7B8]
 
−
** [http://www.uniprot.org/uniprot/P10369 P10369]
 
−
** [http://www.uniprot.org/uniprot/P06986 P06986]
 
−
</div>
 
−
{{#set: direction=reversible}}
 
−
{{#set: common-name=histidinol-phosphate aminotransferase|l-phenylalanine:2-oxoglutarate aminotransferase}}
 
−
{{#set: ec-number=ec-2.6.1.9}}
 
−
{{#set: nb gene associated=4}}
 
−
{{#set: nb pathway associated=1}}
 
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina|output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:35, 5 January 2021

Reaction RXN-17781

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=RXN-10908&oldid=76717"