Difference between revisions of "RXN-10912"

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(Created page with "Category:reaction == Reaction RXN66-313 == * direction: ** left-to-right * common-name: ** 4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol 3-dehydro...")
(Created page with "Category:reaction == Reaction RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44. == * direction: ** reversible == Reaction formula == * 1.0 CPD-4124[c] '''+''' 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN66-313 ==
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== Reaction RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44. ==
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
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* common-name:
 
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** 4α-carboxy-4β-methyl-5α-cholesta-8,24-dien-3β-ol 3-dehydrogenase (decarboxylating)
 
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/1.1.1.170 ec-1.1.1.170]
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-4577]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-4578]][c] '''+''' 1 [[NADH-P-OR-NOP]][c]
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* 1.0 [[CPD-4124]][c] '''+''' 1.0 [[DIMETHYL-GLYCINE]][c] '''<=>''' 1.0 [[BETAINE]][c] '''+''' 1.0 [[CPD-4125]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[SJ04782]]
 
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** Category: [[annotation]]
 
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6074]], zymosterol biosynthesis:
 
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** '''6''' reactions found over '''14''' reactions in the full pathway
 
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* [[PWY66-4]], cholesterol biosynthesis III (via desmosterol):
 
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** '''14''' reactions found over '''4''' reactions in the full pathway
 
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* [[PWY66-341]], cholesterol biosynthesis I:
 
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** '''14''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[gap-filling]]; source: [[gapfilling_solution_with_meneco_draft_medium]]; tool: [[meneco]]; comment: added for gapfilling
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=33448 33448]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07494 R07494]
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{{#set: reconstruction category=gap-filling}}
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{{#set: direction=left-to-right}}
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{{#set: reconstruction tool=meneco}}
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{{#set: common-name=4&alpha;-carboxy-4&beta;-methyl-5&alpha;-cholesta-8,24-dien-3&beta;-ol 3-dehydrogenase (decarboxylating)}}
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{{#set: reconstruction comment=added for gapfilling}}
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{{#set: ec-number=ec-1.1.1.170}}
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{{#set: reconstruction source=gapfilling_solution_with_meneco_draft_medium}}
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{{#set: nb gene associated=1}}
 
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{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=saccharina_japonica_genome}}
 

Revision as of 15:06, 5 January 2021

Reaction RXN-4208-CPD-4124/DIMETHYL-GLYCINE//CPD-4125/BETAINE.44.

  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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