Difference between revisions of "RXN-10977"

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(Created page with "Category:reaction == Reaction CDP-GLYCEROL-PYROPHOSPHATASE-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/3.6.1.16 ec-3.6.1.16] == Reaction...")
(Created page with "Category:reaction == Reaction AMINOCYL-TRNA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** peptidyl-trna hydrolase ** aminoacyl-trna hydrolase * ec-numbe...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction CDP-GLYCEROL-PYROPHOSPHATASE-RXN ==
+
== Reaction AMINOCYL-TRNA-HYDROLASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** peptidyl-trna hydrolase
 +
** aminoacyl-trna hydrolase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.1.16 ec-3.6.1.16]
+
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-606]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[CMP]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Substituted-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ07747]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* Gene: [[SJ05960]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ02121]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ03879]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
* Gene: [[SJ09079]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00680]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 +
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21695 21695]
+
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
−
* LIGAND-RXN:
+
** [http://www.uniprot.org/uniprot/P44682 P44682]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00855 R00855]
+
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
−
{{#set: ec-number=ec-3.6.1.16}}
+
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=aminoacyl-trna hydrolase|peptidyl-trna hydrolase}}
 +
{{#set: ec-number=ec-3.1.1.29}}
 +
{{#set: nb gene associated=5}}
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools|pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome}}
+
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 15:34, 5 January 2021

Reaction AMINOCYL-TRNA-HYDROLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • peptidyl-trna hydrolase
    • aminoacyl-trna hydrolase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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