Difference between revisions of "RXN-10977"

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(Created page with "Category:reaction == Reaction AMINOCYL-TRNA-HYDROLASE-RXN == * direction: ** left-to-right * common-name: ** peptidyl-trna hydrolase ** aminoacyl-trna hydrolase * ec-numbe...")
(Created page with "Category:reaction == Reaction RXN-9538 == * direction: ** left-to-right * common-name: ** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific) ** fa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction AMINOCYL-TRNA-HYDROLASE-RXN ==
+
== Reaction RXN-9538 ==
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** peptidyl-trna hydrolase
+
** trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)
−
** aminoacyl-trna hydrolase
+
** fatty acid synthase
 +
** myristoyl-[acp] reductase
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.1.1.29 ec-3.1.1.29]
+
** [http://enzyme.expasy.org/EC/1.3.1.10 ec-1.3.1.10]
 +
** [http://enzyme.expasy.org/EC/1.3.1.39 ec-1.3.1.39]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
* synonymous:
 +
** trans tetradec-2-enoyl-[acp] reductase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[N-Substituted-Aminoacyl-tRNA]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-Substituted-Amino-Acids]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[tRNAs]][c]
+
* 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Tetradec-2-enoyl-ACPs]][c] '''=>''' 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* Gene: [[SJ05960]]
+
* Gene: [[SJ10624]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
* Gene: [[SJ02121]]
+
* Gene: [[SJ04443]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ04769]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06616]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ17743]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ19629]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ18059]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ06617]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00320]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ13014]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ03879]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ00613]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[SJ06944]]
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
+
** Category: [[annotation]]
−
* Gene: [[SJ09079]]
+
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ11672]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 +
* Gene: [[SJ03883]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[SJ00680]]
+
* Gene: [[SJ15983]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
−
** Category: [[orthology]]
 
−
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5994]], palmitate biosynthesis (animals and fungi, cytoplasm):
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/Q9JV42 Q9JV42]
 
−
** [http://www.uniprot.org/uniprot/P44682 P44682]
 
−
** [http://www.uniprot.org/uniprot/Q9PII7 Q9PII7]
 
−
** [http://www.uniprot.org/uniprot/Q9CJI1 Q9CJI1]
 
−
** [http://www.uniprot.org/uniprot/P0A7D1 P0A7D1]
 
−
** [http://www.uniprot.org/uniprot/Q59989 Q59989]
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aminoacyl-trna hydrolase|peptidyl-trna hydrolase}}
+
{{#set: common-name=trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)|fatty acid synthase|myristoyl-[acp] reductase}}
−
{{#set: ec-number=ec-3.1.1.29}}
+
{{#set: ec-number=ec-1.3.1.39|ec-2.3.1.85|ec-2.3.1.86|ec-1.3.1.10}}
−
{{#set: nb gene associated=5}}
+
{{#set: synonymous=trans tetradec-2-enoyl-[acp] reductase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: nb gene associated=15}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=pathwaytools|pantograph}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=saccharina_japonica_genome}}

Revision as of 13:16, 14 January 2021

Reaction RXN-9538

  • direction:
    • left-to-right
  • common-name:
    • trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)
    • fatty acid synthase
    • myristoyl-[acp] reductase
  • ec-number:
  • synonymous:
    • trans tetradec-2-enoyl-[acp] reductase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis (animals and fungi, cytoplasm):
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "trans tetradec-2-enoyl-[acyl-carrier-protein] reductase (nadph, b-specific)" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "myristoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Property "Synonymous" (as page type) with input value "trans tetradec-2-enoyl-[acp] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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