Difference between revisions of "RXN-11135"

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(Created page with "Category:reaction == Reaction RXN-7658 == * direction: ** reversible * common-name: ** geranylgeranyl diphosphate reductase == Reaction formula == * 1 CPD-7002[c] '''+...")
(Created page with "Category:reaction == Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN == * direction: ** left-to-right * common-name: ** udp-xylose synthase * ec-number: ** [http://enzyme.expas...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-7658 ==
+
== Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN ==
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
* common-name:
 
* common-name:
−
** geranylgeranyl diphosphate reductase
+
** udp-xylose synthase
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/4.1.1.35 ec-4.1.1.35]
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-7002]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[PROTON]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[UDP-D-XYLOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[SJ15264]]
+
* Gene: [[SJ10476]]
 +
** Category: [[annotation]]
 +
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[SJ00231]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
Line 14: Line 19:
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-5063]], phytyl diphosphate biosynthesis:
+
* [[PWY-4821]], UDP-&alpha;-D-xylose biosynthesis:
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23917 23917]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08754 R08754]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01384 R01384]
−
{{#set: direction=reversible}}
+
{{#set: direction=left-to-right}}
−
{{#set: common-name=geranylgeranyl diphosphate reductase}}
+
{{#set: common-name=udp-xylose synthase}}
−
{{#set: nb gene associated=1}}
+
{{#set: ec-number=ec-4.1.1.35}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation|orthology}}
 
{{#set: reconstruction category=annotation|orthology}}

Revision as of 15:38, 5 January 2021

Reaction UDP-GLUCURONATE-DECARBOXYLASE-RXN

  • direction:
    • left-to-right
  • common-name:
    • udp-xylose synthase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-4821, UDP-α-D-xylose biosynthesis:
    • 2 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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