Difference between revisions of "RXN-11195"

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(Created page with "Category:pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] == * taxonomic-range: ** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-3...")
(Created page with "Category:reaction == Reaction RXN-11245 == * direction: ** left-to-right * common-name: ** 3-hydroxyacyl-coa dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.1...")
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[[Category:pathway]]
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[[Category:reaction]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5070 PWY-5070] ==
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== Reaction RXN-11245 ==
* taxonomic-range:
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* direction:
** [http://metacyc.org/META/NEW-IMAGE?object=tax-33090 tax-33090]
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** left-to-right
 
* common-name:
 
* common-name:
** gibberellin biosynthesis i (non c-3, non c-13 hydroxylation)
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** 3-hydroxyacyl-coa dehydrogenase
== Reaction(s) found ==
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* ec-number:
* [[RXN1F-162]]
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** [http://enzyme.expasy.org/EC/1.1.1.35 ec-1.1.1.35]
* [[RXN1F-163]]
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== Reaction formula ==
* [[RXN1F-165]]
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* 1 [[CPD-12199]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-10600]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
== Reaction(s) not found ==
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== Gene(s) associated with this reaction  ==
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6523 RXN-6523]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-164 RXN1F-164]
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* Gene: [[SJ16470]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-99 RXN1F-99]
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** Category: [[annotation]]
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-6541 RXN-6541]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
{{#set: taxonomic-range=tax-33090}}
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* Gene: [[SJ03584]]
{{#set: common-name=gibberellin biosynthesis i (non c-3, non c-13 hydroxylation)}}
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** Category: [[annotation]]
{{#set: nb reaction found=3}}
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
{{#set: completion rate=0.43}}
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* Gene: [[SJ06127]]
{{#set: nb total reaction=7}}
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ16180]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ21390]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ07211]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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** Category: [[orthology]]
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*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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* Gene: [[SJ17348]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: go-term, Comment: n.a
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* Gene: [[SJ01444]]
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** Category: [[annotation]]
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*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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</div>
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== Pathway(s)  ==
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* [[PWY-6435]], 4-hydroxybenzoate biosynthesis III (plants):
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** '''4''' reactions found over '''5''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== External links  ==
 +
{{#set: direction=left-to-right}}
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{{#set: common-name=3-hydroxyacyl-coa dehydrogenase}}
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{{#set: ec-number=ec-1.1.1.35}}
 +
{{#set: nb gene associated=8}}
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{{#set: nb pathway associated=1}}
 +
{{#set: reconstruction category=annotation|orthology}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}

Revision as of 20:45, 18 December 2020

Reaction RXN-11245

  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-coa dehydrogenase
  • ec-number:

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6435, 4-hydroxybenzoate biosynthesis III (plants):
    • 4 reactions found over 5 reactions in the full pathway

Reconstruction information

External links