Difference between revisions of "RXN-11319"

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(Created page with "Category:reaction == Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN == * direction: ** left-to-right * common-name: ** hydroxymethylglutaryl-coa lyase * ec-number: ** [http:...")
(Created page with "Category:reaction == Reaction GLYCEROL-DEHYDROGENASE-NADP+-RXN == * direction: ** reversible * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.372 ec-1.1.1.372] ** [http:...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction HYDROXYMETHYLGLUTARYL-COA-LYASE-RXN ==
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== Reaction GLYCEROL-DEHYDROGENASE-NADP+-RXN ==
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** hydroxymethylglutaryl-coa lyase
 
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.1.3.4 ec-4.1.3.4]
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** [http://enzyme.expasy.org/EC/1.1.1.372 ec-1.1.1.372]
 +
** [http://enzyme.expasy.org/EC/1.1.1.72 ec-1.1.1.72]
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[3-HYDROXY-3-METHYL-GLUTARYL-COA]][c] '''=>''' 1 [[3-KETOBUTYRATE]][c] '''+''' 1 [[ACETYL-COA]][c]
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* 1 [[GLYCEROL]][c] '''+''' 1 [[NADP]][c] '''<=>''' 1 [[GLYCERALD]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[SJ21564]]
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* Gene: [[SJ05644]]
** Category: [[annotation]]
 
*** Source: [[saccharina_japonica_genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** Source: [[output_pantograph_arabidopsis_thaliana]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
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*** Source: [[output_pantograph_nannochloropsis_salina]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
*** Source: [[output_pantograph_ectocarpus_siliculosus]], Tool: [[pantograph]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[LEU-DEG2-PWY]], L-leucine degradation I:
 
** '''4''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY66-367]], ketogenesis:
 
** '''4''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-5074]], mevalonate degradation:
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* category: [[orthology]]; source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* category: [[orthology]]; source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* category: [[annotation]]; source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
* METANETX-RXN : MNXR95711
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24405 24405]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R01360 R01360]
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** [http://www.genome.jp/dbget-bin/www_bget?R01041 R01041]
* UNIPROT:
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{{#set: direction=reversible}}
** [http://www.uniprot.org/uniprot/P35914 P35914]
+
{{#set: ec-number=ec-1.1.1.372|ec-1.1.1.72}}
** [http://www.uniprot.org/uniprot/P35915 P35915]
 
** [http://www.uniprot.org/uniprot/Q8L7K2 Q8L7K2]
 
{{#set: direction=left-to-right}}
 
{{#set: common-name=hydroxymethylglutaryl-coa lyase}}
 
{{#set: ec-number=ec-4.1.3.4}}
 
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools|pantograph}}
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{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=output_pantograph_arabidopsis_thaliana|saccharina_japonica_genome|output_pantograph_ectocarpus_siliculosus}}
+
{{#set: reconstruction source=output_pantograph_nannochloropsis_salina}}

Revision as of 08:36, 15 March 2021

Reaction GLYCEROL-DEHYDROGENASE-NADP+-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

  • METANETX-RXN : MNXR95711
  • LIGAND-RXN: